Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre4g03915 ATGGCAAATCTCACCTTAGACTCATCCTTTGTAAAGATTCCAACTATAAAGTTTAAAAAACTTTTCATCAATGGAGAATTCGTGGATTCAGTTTCAGGAAAAACATTTGAGACCGTTGATCCAAGAACAGAGGAAGTGATTACAAAAATAGCAGAAGCTACGAAAGAAGATGTTGATATTGCTGTCAAAGCTGCTCGTGAAGCATTTGATTTTGGTCCATGGCCACGTATGCCTGGTGCTGAGAGAGCAAAGATTATGATGAAATGGGCAGGACTAATTGAACAAAACATAGAAGAACTAGCAGCATTAGATACAATTGATGGAGGGAAACTATATAGTTGGTGTTATGCAGTTGATGTACCTGAATCAGCCAATATCCTACGTTACTATGCTGGTGCTGCTGATAAAATTCATGGAGAAGTTTTCAAAACTTCTAGGAACCTTCATTTGTATACATTGATGGAACCTATTGGTGTTGTTGGACATATTATACCTTGGAATGTTCCTAGTGTTATGTTCTTTGCTAAGGTTGCTCCTTCTTTGGCTGCTGGTTGTACTATGGTTCTTAAGCCAGCTGAACAAACACCTCTCTCTGCTTTGTTTTATGCTCATCTTGCTAAGGAGGCTGGAATTCCAGATGGAGTGATCAATGTACTACCAGGATTTGGTTCAACTGCTGGAGCTGCAATAGCCTCACATATGGACATTGATTCAGTAAGTTTTACAGGTTCAACCGAAACAGGCCGTCGAGTAATGCAGGCTGCGGCAATGAGCAATTTAAAGCCGGTATCGCTTGAATTAGGAGGAAAATCACCTGTCTTAGTTTTTGATGATGCTGATGTTGATAAAGCTGTTGATCTTGCTCTATTTGGTATCCTACACAATAAGGGAGAAATATGTGTTGCATTTTCTAGAGTTTTTGTCCAAGAAGGAATTTATGATGAATTTGAGAAGAAAGTGGTGGAAAAGGCAAAAAATTGGGTAATTGGTGACCCTTTTCATCCTAAAGTTCAACAAGGACCACAAACTAGTAAGGCACAATTTGATAAAATTCTTTCCTATATTGAGCATGGAAAGAATGAAGGAGCTACACTATTAACTGGGGGTAAGAAAGTAGGCAACAAAGGATACTACATTGAGCCTACTATTTTTACCAATGTTAAGGATGACATGCTAATAGCACAAGATGAAATATTTGGACCTGTGATGGCACTTTCTAAGTTCAAGACAATTGAGGAAGCAATTAAGAAGGCAAACAATACCAAATATGGCCTAGCAGCAGGGATAGTGACAAAAGATTTGGACATTGCCAATACTGTCTCAAGGTCAATTCGTGCAGGCATCATTTGGATTAATTGTTACTTTGCCTTTGATATTGATTGCCCTTTTGGAGGGTATAAGATGAGTGGATTTGGAAGAGATTATGGATTGGATGCACTTCACAAGTATCTTCAAGTTAAATCTGTTGCAACTCCTATTTACAATTCTCCATGGCTTTGA 1500 0.3847 MANLTLDSSFVKIPTIKFKKLFINGEFVDSVSGKTFETVDPRTEEVITKIAEATKEDVDIAVKAAREAFDFGPWPRMPGAERAKIMMKWAGLIEQNIEELAALDTIDGGKLYSWCYAVDVPESANILRYYAGAADKIHGEVFKTSRNLHLYTLMEPIGVVGHIIPWNVPSVMFFAKVAPSLAAGCTMVLKPAEQTPLSALFYAHLAKEAGIPDGVINVLPGFGSTAGAAIASHMDIDSVSFTGSTETGRRVMQAAAMSNLKPVSLELGGKSPVLVFDDADVDKAVDLALFGILHNKGEICVAFSRVFVQEGIYDEFEKKVVEKAKNWVIGDPFHPKVQQGPQTSKAQFDKILSYIEHGKNEGATLLTGGKKVGNKGYYIEPTIFTNVKDDMLIAQDEIFGPVMALSKFKTIEEAIKKANNTKYGLAAGIVTKDLDIANTVSRSIRAGIIWINCYFAFDIDCPFGGYKMSGFGRDYGLDALHKYLQVKSVATPIYNSPWL 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre4g03915 499 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 269 458 IPR016163 GO:0016620
Trre4g03915 499 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 293 304 IPR016160 GO:0016491
Trre4g03915 499 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 23 487 IPR016162 GO:0016491
Trre4g03915 499 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 13 490 - -
Trre4g03915 499 FunFam Aldehyde dehydrogenase, putative 461 487 - -
Trre4g03915 499 Pfam Aldehyde dehydrogenase family 27 489 IPR015590 GO:0016491
Trre4g03915 499 FunFam ALD5p Mitochondrial aldehyde dehydrogenase 23 288 - -
Trre4g03915 499 SUPERFAMILY ALDH-like 10 495 IPR016161 GO:0016491
Trre4g03915 499 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 265 272 IPR029510 GO:0016491
Trre4g03915 499 FunFam Aldehyde dehydrogenase3 269 458 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre4g03915 Trre-Chr4 47297024 47303018 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre4g03915 8 499 Aldehyde Dehydrogenase Gene Family AT3G24503 70.791 0.0 740
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre4g03915 K12355 - gmx:100784449 895.19