Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre4g03849 ATGTTACCTCAAACACTAGTAATCCCTGAATTTCTCTTTCTTACATTCATACTCATTCTATTGGTTTCTATATTTCTTCACTCAAAATTCCATAAAAGAAATGGTAGGAAATATCCACCGGGTCCAAAACCATTGCCAATTATTGGTAACCTTCACATGCTAGGAAAACTTCCACATCGTACCCTTCAATCCCTTTCACAAAAATATGGACCTATAATGTCATTGAAATTAGGACAAGTCCAAACCATTGTAGTTTCATCACCTCAAATTGCTGAACTATTCCTCAAGACCCATGATAGTATTTTCTGTAATAGGCCCAACACTTTTGCTTCAAGTTATTTATCATATGGTAGAAAGGGCTTAGTTTTCACCGAATATGGGGACTATTGGCGCAATATGAGGAAATTGTGCAACACACAATTATTGCATACTTCAAAAGTTGAAATGTTTGCTCCTTTGAGAAAGGAAGAGGTTGGATTTTTGATCAAGTCATTAAGAAAATCAGCAACATTACATGAGGTTGTTGATGTTAGCAAGATTGTGGCTGAGCTTATTGAGAATATCAATTACAAAATGATATTGGGTCGAAGCAAAGATAATAAGTTCGATTTTAAAGAGCTTGTTCACGACGAATTTACATTGGTTGGAATGTTTAATTTGGGTGATTATCTACCTTGGTTACGTCCGTTTGATCTCCAGGGAATAAAAAGAGGATGTAAGAAAACAAGGAAGCAACTTGACGAATTGTTGGAGCTCATAATCAAAGAGCACGAGAATCCATCAATTAAAGAACAAAAAGGTCATCACAACAAAGATTTTGTAGATACATTGTTATCACTCATGAACCAACCAAATGATTCCAAAGACAAAAATTATGACATTGACAGAACCAACATCAAGGCTCTTATATTGGACATGATTTCAGCAACTATAGACACAACATCTGTTGTAACTGATTGGGCACTTTCACTACTCCTAAAGCATCCTAATGCAATGAAGAAGCTTCAACATGAGCTAGAAAATGTGGTTGGAATGAATAGACAAGTGGAAGAGACACACTTGAAATATTTGCCTTACTTGTCTATGGTAATGAAAGAGACCTTTAGGTTGTATCCTGTTGGACCTTTGTTAATACCACATCAGTGTCTTCAAGATGTGATTGTTGATGGTTATTACATAAAGAAAAATACAACAATTTTAATAAATGCATGGACAATAGGAAGAGATACTAAGGTTTGGTCGGATAATGCCGAGTTGTTTTGTCCAGAGAGATTTGAAGATGGCATCATAGATGTTTATGGACATGATTTTCAACTCTTACCATTTAGTTCAGGTCGAAGACGTTGTCCTGGAATTGAAATGGGATTAAGGACTTCGAAATTGATTGTGGCTCAGTTAATGCATTGTTTCAATTGGGAACTTCCAGATGGTATGTCTCTAGATGATTTAGATATGTCTGAAAAATTTGAACTCTCTATGCCGAAAAGTCAACCCTTATTAGCTATGCCAACCTATCGTTTGAATCCTTAG 1530 0.3569 MLPQTLVIPEFLFLTFILILLVSIFLHSKFHKRNGRKYPPGPKPLPIIGNLHMLGKLPHRTLQSLSQKYGPIMSLKLGQVQTIVVSSPQIAELFLKTHDSIFCNRPNTFASSYLSYGRKGLVFTEYGDYWRNMRKLCNTQLLHTSKVEMFAPLRKEEVGFLIKSLRKSATLHEVVDVSKIVAELIENINYKMILGRSKDNKFDFKELVHDEFTLVGMFNLGDYLPWLRPFDLQGIKRGCKKTRKQLDELLELIIKEHENPSIKEQKGHHNKDFVDTLLSLMNQPNDSKDKNYDIDRTNIKALILDMISATIDTTSVVTDWALSLLLKHPNAMKKLQHELENVVGMNRQVEETHLKYLPYLSMVMKETFRLYPVGPLLIPHQCLQDVIVDGYYIKKNTTILINAWTIGRDTKVWSDNAELFCPERFEDGIIDVYGHDFQLLPFSSGRRRCPGIEMGLRTSKLIVAQLMHCFNWELPDGMSLDDLDMSEKFELSMPKSQPLLAMPTYRLNP 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre4g03849 509 CDD CYP71-like 68 499 - -
Trre4g03849 509 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 442 451 IPR017972 GO:0005506|GO:0016705
Trre4g03849 509 Coils Coil 332 352 - -
Trre4g03849 509 PANTHER CYTOCHROME P450 93A3-LIKE 16 508 - -
Trre4g03849 509 Pfam Cytochrome P450 39 496 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre4g03849 509 PRINTS E-class P450 group I signature 361 379 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre4g03849 509 PRINTS E-class P450 group I signature 449 472 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre4g03849 509 PRINTS E-class P450 group I signature 66 85 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre4g03849 509 PRINTS E-class P450 group I signature 298 315 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre4g03849 509 PRINTS E-class P450 group I signature 439 449 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre4g03849 509 PRINTS E-class P450 group I signature 318 344 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre4g03849 509 Gene3D Cytochrome P450 28 502 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre4g03849 509 SUPERFAMILY Cytochrome P450 39 506 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre4g03849 509 FunFam Cytochrome P450 83B1 25 502 - -
Trre4g03849 509 PRINTS P450 superfamily signature 309 326 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre4g03849 509 PRINTS P450 superfamily signature 362 373 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre4g03849 509 PRINTS P450 superfamily signature 440 449 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre4g03849 Trre-Chr4 46440902 46444523 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre4g03849 12 509 Cytochrome P450 AT5G07990 39.567 5.50e-125 373
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre4g03849 - - gmx:100782181 639.032