Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre4g03813 ATGGCAAAGGCAAGGGATAGGACTGAGGATTTCAAAGATGCCGTGCGCCAAAGTGCTCGCTCTTTGGGGTATGATGAGGCTAAATTGGCATCCATTTTGGCATCTTTTATTATTCATAAACCTCCACAAAGGTCCCCATTCACCAAAGCTGCATATAAGACGCTCGAGAGTATTGGAGAATTGGACCATTTTTTGTTAAAGCATAGAAAGGACTATACGGATCTGCACCGAACAACAGAACATGAGAGAGATAGCATTGAGAATGAAGTTAGTGCTTTTATTAAAACTTGCCAGGAACAAATTGACGTTCTTAAGAATAGTATAAACAATGAAGAGGAAAACTCAAAAGGTTGGCTTGGCATCACAACTGCAAAGGCTAACGCCGACACCATTGCCCACAAACATGGGGTGGTTCTAATTTTAAGTGAGAGGCTTCATTCGGTTACGGCACAGTTTGATCAACTAAGAGCTATACGTTTCCAGGATGCTATTAATAGGGCAATACCACGAAGAAAACTTAATCGTGTAACCAGGAAAGAATCTACCGAAACCTCTAATTCAGGTGATGTGGAGCTCAGAGAACCAGATGAGTTGCGCAGTGAACCTCTAAGAGTCCAACAGCAACTCTTGGATGATGAAACACGTGCTCTTCAGGTGGAATTGTCTAGTCTTCTAGACACAGTTCAAGAAACTGAAACTAAGATGGTAGAAATGTCTGCATTAAATCACTTAATGGCTACACATGTTTTGCAGCAAGCTCAACAAATTGAGCATTTGTATGACCAGGCTGTTGAAGCTACCAAGAATGTTGAGCTTGGTAACAAAGAACTCTCACAAGCCATTCAACGAAATAGCAGTAGCAGAACATTTCTTTTACTATTTCTGTTTGTGCTCACTTTTTCCATCATCTTTCTTGATTGGTATAGTTAA 930 0.4065 MAKARDRTEDFKDAVRQSARSLGYDEAKLASILASFIIHKPPQRSPFTKAAYKTLESIGELDHFLLKHRKDYTDLHRTTEHERDSIENEVSAFIKTCQEQIDVLKNSINNEEENSKGWLGITTAKANADTIAHKHGVVLILSERLHSVTAQFDQLRAIRFQDAINRAIPRRKLNRVTRKESTETSNSGDVELREPDELRSEPLRVQQQLLDDETRALQVELSSLLDTVQETETKMVEMSALNHLMATHVLQQAQQIEHLYDQAVEATKNVELGNKELSQAIQRNSSSRTFLLLFLFVLTFSIIFLDWYS 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre4g03813 309 FunFam Syntaxin-81 like 212 306 - -
Trre4g03813 309 Gene3D - 211 306 - -
Trre4g03813 309 MobiDBLite consensus disorder prediction 175 197 - -
Trre4g03813 309 Coils Coil 94 114 - -
Trre4g03813 309 SUPERFAMILY t-snare proteins 56 273 IPR010989 GO:0016020|GO:0016192
Trre4g03813 309 PANTHER SYNTAXIN-18 1 309 - -
Trre4g03813 309 Pfam SNARE-complex protein Syntaxin-18 N-terminus 6 86 IPR019529 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre4g03813 Trre-Chr4 46064089 46069574 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre4g03813 65 309 SNARE and Associated Proteins AT1G51740 76.016 4.67e-118 338
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre4g03813 K08492 - gmx:100778011 532.717