Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre4g03805 ATGAATAATACACCATCTAACAACCATACTACTGAGCCTAGGGATGTTGCTAGTTCGAGTTCTAATTCCACCGGAATTAACCTACCACCGAGGAAGGTCTTACCAGACTCGAAGTTTCAACGTGTTTTACATACCCCACTTATGACAGAACCCCCTGGCACATCAATCAATCAAGTAGGTAATAAGTTCTACGAGGTGTTTCAACAAAAACATGGAAGTTATGCTGATCTTCCTGCTGCCAAAATTACGGAACTAATGAAATCATCTAGTTTGGATAATGCTCCTACTCAATCACTTTTGAGTGTTGTGAATGGTATCTTAGAAGAAAGTGTTGAAAGAAGAAATGGAGAAATACCCCTTCGTGTGGCTTGCTTGTTAAGAAAAGTTGTCCAAGAGATTGAGCGGCGTATATCAACGCAGCAAGAACATTTAAGAACGCAAAACAATCTTTTTAAGACTCGCGAAGAAAAATATAAATCAAGAATATCAGTACTTGAGGCTCTTGCATCAGGAACAAAGGAAGAGAGTAAGCTTGTTCTTACAAGTCAACTTCAACAGTTGAAGAATGAGAATATCATAAAGGAAGAAAAAAATGCACATCATGACTCGAAACCGCCAATTGAGAAGATTGTAAAGGAAGAAACGAAAGAAAATGACTCGATACATATCGATAAGATTAAAGATGAGGAAGAAAAGAAAGAAATTGATAAAGAAGTTATTAGATTGATTAAAGAAGTGGAAGATAAAAATTTGGAAAAAAAGGAAATTGATAAAGAAGTTAGTAGATTGATTAAAGAGGTGGATGACAAAAACATGAAAATTTCAACATTGGAGCAAGACTTAGAAACAATTCAAAAAAGATATGAAGTGCAATGCTCAAAGATGGATTCAGAAGCTAAGAATGAAATCGATAAAGAAGTTATTCGATTGAATAAAGAGATCGAGGACAAAAATACGGAAATTTCGACGTTGAAGCAAGACTTAGAAACAATCCAAAAAAGATATGAAGTACAATGCTCAAAGATGGAATCAGAAGCTAAGAATGAAATGGATAAAGAAGTTATTAGATTGAATAAAGAAATGGAAGACAAAAATACGGAAATTTCGACATTGAAGCAAGACTTAGAAACAATTAAAAAAAGTTATGAAGTACAATGTTCAAAGTTGGAATTAGAAGCTAAGGATTCTAAAGGATTGATTAAAGAGATGGAAGATAAAAATATGGAAATTTCAACATTGAAGCAAGAGTTAGAAACAATCAAAAAAAGTTATGAAGCACAATGTTCAAAGTTGGAATCAGAAGTTAAAGATGCTAAAGGAGAATTGAAACAGAAATCACAAGAATATGAGGATTTATTGGAAAAGTTAAGAAATAAGCTTCAAGAGAGTGAAACTTTGACTAAGTTAAAATATGAGAAGTGGAATATGAAACAAAACCTAATGCAAAAAGCTATAAATTTTCAGTTTGGTTCTATACAGCAATTGAAATTGTCTTGGGAATCCATTAAGCAAGATGTTATGAAAGAGCAAACGATTTACTCAGAGGAATGCAAAAGATTTGGTGTAAATCTTAAGCCACTAGTGCATGCAGCTGAGAATTATCATACAATTCTTGCAGAAAACAGAAAATTATTTAATGAACTTCAAGAATTAAAAGGAAATATTAGAGTATATTGTAGAATTAGACCATTTGTACCTGGCCAAAAAGAAAAACAATCTATTGTTGAAAGAATTGGTGAATCAGAGTTGGTTGTAGCAAATCCAAGCAAAAAAGAAGCACTCAAAACATTTAAGTTTAATAAGATCTTTGGCCCTACCTCATCTCAAGCTGAAGTATATGAAGACATACAAGCCTTTATAAGATCAGTACTTGATGGTTATAATGTTTGTATATTTGCTTATGGCCAAACAGGTTCAGGAAAAACTTATACAATGAGTGGTCCAAATAATGCAACTAATGAGAGTGTTGGTGTTAACTATAGAGCTTTAAATGATCTCTTCAACATATCAGCAATACCTGATGCTAGTATGCACCCTGTTAAATCAACTGCTGATGTCATAAAGCTAATGGACATTGGTTTGAAAAATAGAGCAAAGAGTTCAACTGCTATGAATGAAAGAAGTAGCCGTTCTCACAGTGTGGTTTCGATTCATGTTCGCGGAGCAGATAAGAAATCTGGTTCGACTCTCGTTGGCAATCTTCATTTGGTAGATTTGGCAGGAAGTGAAAGGATAGATCGGTCTGAAGTAACCGGTGATAGATTAAAGGAAGCACAACATATTAACAAATCATTGTCTGCTCTTGGAGATGTCATTTTTGCCCTTGCTCAAAAGAGTTCTCATATACCATATAGAAACAGCAAGCTCACACAAATTCTGCAAACCGCTCTCGGTGGTCATGCAAAGACACTCATGTTAGTCCAAATTACTTCAGACATAAAGTCTTATTCCGAATCTTTGAGTACTTTGAAGTTTGCTGAGAGGGTTTCTGGAGTTGAGTTAGGAGTTGCAAAAAGTTCAAAAGATGGAAGAGATGTTAGAGAATTAATGGAACAGGTGGCTTCTCTCAAAGATACGATTTCGACAAAAGATGAAGAAATCGAGCGACTACAATTACTTAAGGATCTAAAAAATGTTAATTCTGATAAGCTTGAAGATTAA 2661 0.3424 MNNTPSNNHTTEPRDVASSSSNSTGINLPPRKVLPDSKFQRVLHTPLMTEPPGTSINQVGNKFYEVFQQKHGSYADLPAAKITELMKSSSLDNAPTQSLLSVVNGILEESVERRNGEIPLRVACLLRKVVQEIERRISTQQEHLRTQNNLFKTREEKYKSRISVLEALASGTKEESKLVLTSQLQQLKNENIIKEEKNAHHDSKPPIEKIVKEETKENDSIHIDKIKDEEEKKEIDKEVIRLIKEVEDKNLEKKEIDKEVSRLIKEVDDKNMKISTLEQDLETIQKRYEVQCSKMDSEAKNEIDKEVIRLNKEIEDKNTEISTLKQDLETIQKRYEVQCSKMESEAKNEMDKEVIRLNKEMEDKNTEISTLKQDLETIKKSYEVQCSKLELEAKDSKGLIKEMEDKNMEISTLKQELETIKKSYEAQCSKLESEVKDAKGELKQKSQEYEDLLEKLRNKLQESETLTKLKYEKWNMKQNLMQKAINFQFGSIQQLKLSWESIKQDVMKEQTIYSEECKRFGVNLKPLVHAAENYHTILAENRKLFNELQELKGNIRVYCRIRPFVPGQKEKQSIVERIGESELVVANPSKKEALKTFKFNKIFGPTSSQAEVYEDIQAFIRSVLDGYNVCIFAYGQTGSGKTYTMSGPNNATNESVGVNYRALNDLFNISAIPDASMHPVKSTADVIKLMDIGLKNRAKSSTAMNERSSRSHSVVSIHVRGADKKSGSTLVGNLHLVDLAGSERIDRSEVTGDRLKEAQHINKSLSALGDVIFALAQKSSHIPYRNSKLTQILQTALGGHAKTLMLVQITSDIKSYSESLSTLKFAERVSGVELGVAKSSKDGRDVRELMEQVASLKDTISTKDEEIERLQLLKDLKNVNSDKLED 886
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre4g03805 886 ProSiteProfiles Kinesin motor domain profile. 554 832 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre4g03805 886 PANTHER KINESIN-LIKE PROTEIN KLP-3 36 240 IPR027640 GO:0003777|GO:0007018
Trre4g03805 886 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 554 870 IPR027417 -
Trre4g03805 886 Coils Coil 300 345 - -
Trre4g03805 886 PRINTS Kinesin heavy chain signature 702 719 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre4g03805 886 PRINTS Kinesin heavy chain signature 782 803 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre4g03805 886 PRINTS Kinesin heavy chain signature 733 751 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre4g03805 886 PRINTS Kinesin heavy chain signature 626 647 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre4g03805 886 Coils Coil 232 287 - -
Trre4g03805 886 Gene3D - 392 432 - -
Trre4g03805 886 Gene3D - 301 343 - -
Trre4g03805 886 Gene3D - 348 390 - -
Trre4g03805 886 Gene3D - 254 296 - -
Trre4g03805 886 FunFam Kinesin-related protein3 670 874 - -
Trre4g03805 886 SMART kinesin_4 552 840 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre4g03805 886 Gene3D Kinesin motor domain 671 874 IPR036961 -
Trre4g03805 886 MobiDBLite consensus disorder prediction 1 33 - -
Trre4g03805 886 Coils Coil 347 469 - -
Trre4g03805 886 Gene3D Kinesin motor domain 497 670 IPR036961 -
Trre4g03805 886 Pfam Kinesin motor domain 672 830 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre4g03805 886 Pfam Kinesin motor domain 560 669 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre4g03805 886 Coils Coil 846 873 - -
Trre4g03805 886 MobiDBLite consensus disorder prediction 1 28 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre4g03805 Trre-Chr4 45992488 45998409 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre4g03805 244 883 Calmodulin-binding Proteins AT5G65930 29.582 6.23e-62 226
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre4g03805 K10406 - gmx:100779403 1084.32