Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre4g03776 ATGGCTACTAAGAGATTCTTAGATGATTCTGATCAAGATCCGGATAATAATAATCCAAACGACAAACGAATGAGACCTACTAGACCTTCTTTAGCTTATGTAATTGGAAAAGCAATTGAAGTTCAAAACATGAAGAACCTTTTAGCTGCCTTGGAACCTTTGTTTAAAAGAGTGGTGAGTGAAGAAGTGGATAAAGCAATGAGAAAGCGTTTTCCATGTTCCATCAATCGGTCACCTTCATTAAGAATCCAAGCCCCAAAGGATAAACCACCAACCTTACAACTCTCATTCAACAAAACACTAACCCTCCCAATTTTCACAGGTAGTAGAATAGTTGACAATGAAGGTAACCCCATCAACATAACTCTAGTTGAAAAAATCAACAATAACCAAATTATTCCAACAAGTCTTCCTTACCCTATAAAGCTAGAGATTGTTGTTCTTGATGGGGATTTTCCACTTGATGAAAATGAAAATTGGACTAATGAGGAATTCAATAAATACATAGTGAAGGAAAGAGCTGGGAAAAGACCATTGCTTGGTGGAGAAATGAACATTACTATGAGAGATGGAATTGCACCAATTGGAGACATAGAATTCACTGATAATTCTAGCTGGATTAGGAGTAGGAAATTTAGAGTTGCAGTGAAAGTGAGTCATTATGGGAGTAATCAAATTGTTAGGATTCAAGAAGCAATGACTGAGGCATTTGTTGTTAAGGATCATCGTGGAGAATTGTACAAAAAGCACCACCCACCAAAGCTTGAGGACGATGTGTGGCGCCTAGAGAAAATAGGGAAAGATGGTGCTTTTCATAAGAAAATGACCGATAAAGGGATCAAAACAGTGCAAGATTTCCTCAAATTAGCAGTTATGGATACTCATAAGCTAAGAGAGATTTTGGGCGTTGGGATGTCAGATAAAATGTGGGACGTCACAATAAAGCATGCAATGACTTGTGAAATGGGGAGCAAGGTCTATATATACCGTGGACCTCAATTTGTTATTGTTTTGAATCCAATTTGCAAATTAATTAAAGCTAATATCAATGGACAAGAATATTCCAATAGAGAGATGAGACAAATCAATAAGAGCTATATAGACATGTTGGTGAGAGAAGCATACACAAAATGGCATGAGTTGGAGGAAATTGATAGAGTTTTAAATGATAACATTGCTTTGTTAACCCAAGGTGATCAAATTGTGGAACATTGTCCGAACAATCATCCAGCAACAACAATGGTAACATCATATCATCAAAATAGTTACTATGGTGACAAATCTGCAGAGAATATTGGTAGCTATGTACCAATCAATAATGCACAAATTGGAGGCTCTGAGTGGTCAATATTGAATCAAGGCTATACCACTACAACATTTCCAAATGGATATCCTTTTGGCTTCTCAGGTTCACAATCAGATGGCAACATAACACCTTCAAGTTCAAGCCCTAGGGATATCAATGGTGTCACAAGGCAACTTTAG 1485 0.371 MATKRFLDDSDQDPDNNNPNDKRMRPTRPSLAYVIGKAIEVQNMKNLLAALEPLFKRVVSEEVDKAMRKRFPCSINRSPSLRIQAPKDKPPTLQLSFNKTLTLPIFTGSRIVDNEGNPINITLVEKINNNQIIPTSLPYPIKLEIVVLDGDFPLDENENWTNEEFNKYIVKERAGKRPLLGGEMNITMRDGIAPIGDIEFTDNSSWIRSRKFRVAVKVSHYGSNQIVRIQEAMTEAFVVKDHRGELYKKHHPPKLEDDVWRLEKIGKDGAFHKKMTDKGIKTVQDFLKLAVMDTHKLREILGVGMSDKMWDVTIKHAMTCEMGSKVYIYRGPQFVIVLNPICKLIKANINGQEYSNREMRQINKSYIDMLVREAYTKWHELEEIDRVLNDNIALLTQGDQIVEHCPNNHPATTMVTSYHQNSYYGDKSAENIGSYVPINNAQIGGSEWSILNQGYTTTTFPNGYPFGFSGSQSDGNITPSSSSPRDINGVTRQL 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre4g03776 494 Pfam Calmodulin binding protein-like N-terminal domain 93 242 IPR046831 -
Trre4g03776 494 Pfam Calmodulin binding protein central domain 255 320 IPR046830 -
Trre4g03776 494 MobiDBLite consensus disorder prediction 1 22 - -
Trre4g03776 494 Pfam Calmodulin binding protein C-terminal domain 325 384 IPR046829 -
Trre4g03776 494 MobiDBLite consensus disorder prediction 468 494 - -
Trre4g03776 494 MobiDBLite consensus disorder prediction 1 28 - -
Trre4g03776 494 PANTHER OS02G0177800 PROTEIN 1 464 IPR012416 GO:0005516
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre4g03776 Trre-Chr4 45643408 45648747 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre4g03776 3 385 Calmodulin-binding Proteins AT5G57580 46.272 1.52e-111 342