Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre4g03764 ATGGCTTCCGATTCGTCTTCAGAAGATGGTGCTCTGGATCCTTCAAAATTTAGTAAATTGAGTATGGAGAAAAAAAGAGAGCTCGTATATGAAATATCTAAAGTGTCTCATGATGGTGCATCCGAGATGTTGCAGTCATGTAGTCGTCAAGAGATTTTGCAAATATTGTGTGCTGAGATGGGAAAAGAAAGGAAGTATACTGGGTTGACAAAGGTGAAAATTATCGAAAATCTTCTAAAAATTGTTTCTGAAAAGAATTCAAGCGGACATGATATTGCCACCGACCCTGAACCACATTCAAACGGTCAGAAACCGGCTAAAAGGCAGAGAAAAATTGAGAATCCATCTCGGTTAGCTATTCCTGCAAACAATGTTTTAGTCAATAATGGTGACGATGCAAGTATTAATACCACATACTGCAAAAACTCAGCATGCAAGGCTACCATAAATCAAGCAGATGCATTTTGCAAAAGATGTTCATGTTGTATTTGTCATCAATATGATGACAATAAGGACCCTAGCCTGTGGTTAATATGCAGCTCTGAAGCTCCATTTCCCGGTGTTTCCTGTGGCTTGTCATGCCACCTTGAGTGTGCTTTAAAACATGCTGGTTCTGGAATTGGCAAAGACGGTGAACATCCGAAGCTTGATGGAGGCTTCTACTGTGTCTCATGTGGGAAAGTAAATGATTTACTCGGATGCTGGAGAAAACAACTGATGGTAGCAAAGGATGCCAGACGTGTGGACATTCTATGTTATCGTGTCTCCTTAAGCCAAAAACTTTTACAAGGGACTGTAGTCTATGGAGAGCTTTATGAAATTGTTGATCAAGCCGTGAAGAAACTTGAACCAGAGGTGGGTCCACTGACTGGCTCACCACTAAAGATTGGTAGGGGAATTGTGAACAGGCTTTCTTCAGGACCTGAGGTTCAGAAACTTTGTGGCATTGCTCTTGAGTCACTTGATTCGATGCTTTCTAAAAGGATCTTGCCTCCGACGCCCAATCCAACTATTCAAGATGCGAGTTTATTAGCGCCAAATATGGTGAAGTTTGAAGATGTCACTGCAACATCCCTCACTGTTATTTTGTGTTTGGAAGATCCTTCTGGAGAAAATAATGTTGGTTACGCCATGTGGCATCGCAAAGCTGATGATGTGAACTATCCGTTGGACCCAATTTGCACGAATCTCCTACCAAATAGAAGACTCGACATCATGGATTTACTTCCAGCTACAGAATACAGTTTCAAAGTTGTTTCCAATGATTTGAGGAAGTCGGGTATGTGGGAAGTTAAAGTCACAACAGAGCATGGTGAGGATGAAGTCCCAAATTGTTCAGCAACGGAAAGAAGTCAGAGCCCTGTAACCAACTGTAGCAGTCTTTCCAATCCATCATCAGTGGAAGATGAAACTAATCATAGCGACCAGACCGATAATCGATCAGATAATTATCCTATTTATCACAAGGATAGCAACCAGCTTGCTTCTGCAAATGTATCTAATGATGCTATTAACTGTTCCAATTTGGGCGGAGTGGGACGTCCCACTGATGCAGATTCCTTGTCAGACAAACAGGTTGCTGTCGGAATGACTGGCACTGTACCTAGTTCTGATGCACTAAAGCTTGAAAACAAGCATTCGGCAGAGGAACAAGTAACCGAGGACATGAGCACTGATGATGGGTCAGTTCCAACAGGAAGGGAAGGTGTTCCGGTAGCAGGTAGCTCAAAAGGGGGATTGCCTAATACTCCCGGTAGGTTGGAATTACTTAAAGATGGTCTGGGAAGAAAAGGTAGGTCCAAAGCAAGTGGCAAAGATGTAGAAAATGGATCTGGGAAAAGGAGTGGCCCTCGAGATGGAGGCACATCCAAGAAGAGAAGTGGTGAAAGGCAAGACGAGGGCTGTGAGGGAAATGGTTTTCCAGATCGGGATTTTGAGTATTATGTGAAGGTGATTAGATGGTTAGAGTGTGAAGGACACATTGAAAAGAACTTCAGACAGAAATTTCTGACTTGGTACAGCTTAAGAGCAACCCCTGAAGAAATAAGGATTGTGAAAATATATGTAGATACATTTCATGAAGATCCGGCTTCTCTTGCTGAGCAACTTGTGGACACCTTCTCAGATTGTGTATCAAACAAGAGATCATCATTTCCTGCAGGGTTCTGCATGAAGCTTTGGCATTGA 2187 0.4248 MASDSSSEDGALDPSKFSKLSMEKKRELVYEISKVSHDGASEMLQSCSRQEILQILCAEMGKERKYTGLTKVKIIENLLKIVSEKNSSGHDIATDPEPHSNGQKPAKRQRKIENPSRLAIPANNVLVNNGDDASINTTYCKNSACKATINQADAFCKRCSCCICHQYDDNKDPSLWLICSSEAPFPGVSCGLSCHLECALKHAGSGIGKDGEHPKLDGGFYCVSCGKVNDLLGCWRKQLMVAKDARRVDILCYRVSLSQKLLQGTVVYGELYEIVDQAVKKLEPEVGPLTGSPLKIGRGIVNRLSSGPEVQKLCGIALESLDSMLSKRILPPTPNPTIQDASLLAPNMVKFEDVTATSLTVILCLEDPSGENNVGYAMWHRKADDVNYPLDPICTNLLPNRRLDIMDLLPATEYSFKVVSNDLRKSGMWEVKVTTEHGEDEVPNCSATERSQSPVTNCSSLSNPSSVEDETNHSDQTDNRSDNYPIYHKDSNQLASANVSNDAINCSNLGGVGRPTDADSLSDKQVAVGMTGTVPSSDALKLENKHSAEEQVTEDMSTDDGSVPTGREGVPVAGSSKGGLPNTPGRLELLKDGLGRKGRSKASGKDVENGSGKRSGPRDGGTSKKRSGERQDEGCEGNGFPDRDFEYYVKVIRWLECEGHIEKNFRQKFLTWYSLRATPEEIRIVKIYVDTFHEDPASLAEQLVDTFSDCVSNKRSSFPAGFCMKLWH 728
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre4g03764 728 MobiDBLite consensus disorder prediction 435 488 - -
Trre4g03764 728 MobiDBLite consensus disorder prediction 590 637 - -
Trre4g03764 728 CDD PHD_VIN3_plant 160 225 - -
Trre4g03764 728 MobiDBLite consensus disorder prediction 445 470 - -
Trre4g03764 728 SUPERFAMILY Fibronectin type III 345 446 IPR036116 GO:0005515
Trre4g03764 728 MobiDBLite consensus disorder prediction 533 637 - -
Trre4g03764 728 MobiDBLite consensus disorder prediction 471 485 - -
Trre4g03764 728 ProSiteProfiles Fibronectin type-III domain profile. 345 440 IPR003961 GO:0005515
Trre4g03764 728 Pfam PHD - plant homeodomain finger protein 140 259 IPR032881 -
Trre4g03764 728 MobiDBLite consensus disorder prediction 87 114 - -
Trre4g03764 728 PANTHER VIN3-LIKE PROTEIN 2-RELATED 12 728 IPR044514 GO:0010048|GO:0040029
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre4g03764 Trre-Chr4 45477776 45483571 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre4g03764 4 606 PHD Gene Family AT4G30200 48.031 5.83e-159 472
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre4g03764 - - gmx:100794721 1191.41