Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre4g03755 ATGTCTCAATGTGTGTTAATGTTGTTATCTATGCACAATATTCTTGGAGTTCATGTAAATATTGTCAACACTTTAGAAGGAAATTTGGACTTAACTGTTCATTGCAAATCTGCAGATGATGATCTCGGAGTTCATCTTCTACATCATGGTGATAACTATGGTTTTAGTTTTGGTACTAAAATATTTGGCCGAACTCAATTCTATTGTTCTTTTAGATGGATTAATGAATTACATTATTTTGATATATACATAGAAAGTTCTGTTTATAGCCCTGATTGTGATTACTGCAATTGGCACATAACCAAAGCAGGACCATGTTATATTCAAGACTCAGTGCAGCCTGCATTCTATAGTTGGAATAAAAACAAAATAATTTAA 378 0.3175 MSQCVLMLLSMHNILGVHVNIVNTLEGNLDLTVHCKSADDDLGVHLLHHGDNYGFSFGTKIFGRTQFYCSFRWINELHYFDIYIESSVYSPDCDYCNWHITKAGPCYIQDSVQPAFYSWNKNKII 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre4g03755 125 Pfam Plant self-incompatibility protein S1 18 118 IPR010264 -
Trre4g03755 125 PANTHER - 17 109 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre4g03755 Trre-Chr4 45368626 45369003 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre4g03755 19 108 Carbohydrate Esterase AT3G16970 43.011 2.50e-19 76.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre4g03755 - - cam:101513244 147.132