Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre4g03695 ATGTCAAGATCTTTCGATTCCATCAAGGACATCAATGACGAGAAGGAACTATGGAAGTTGGCTGTTCGAATAGAAGATATCTGGAAAACTGGTGTTGGTAAGCTTGAGCACTTGGAGTTTCTTATTCTCGACAAGCAGGGTGACAATATTCAAGTTATGTTACCTAATGATCTTTGTCCACTTTGGGAGCCAAAACTCAAGGAAGGAAGTACCTATGTTATATCAAATTTCAGAGTTCAGCCAAATGATTTTAAGGTCAAGCTGTGTGATCACCCATTTAACTTGGTGATGGTTGGAGGTGAAGGAGGCACTGTATTAACTCCAACTGAACTTCCAAAAATTCCCAAGTATCGTCTCAACTTTATACCATTCTCAGAAATTAAAAGAGGAAATTACAAACCTGGCCTTTTAGTAGATGTCATAGGAGCAGTCTATGAAGTTCCTCCTCCTAGAGTCAATATAGGATCAAAGAAGTTTCCTACTAACTTCTCTATATCTGATACTAATATGAACATCTTGACATGTGCACTTTGGGGAAAATATGGAACTGAGTTCTTAGATAACTACAGCCAGAGCAGTGGTGGTGGACCTGTCATTGTTATAATAAAACATGCTCAGATTAAGGAGGCTCAAGGAAATTATGACTTAACAATATCAAATGCATGGAGTGGAACAAAAATTATGATGGATCCAGAATTACCGGAGATTAAAGATTTCATTACCAGCTTGCCTGATGACTTTGTTGCTCAAACTCAATCTGCAAGCAACAATATTACTGGAAGTAGCCAATTGCAACAGATCTCTAACGGTTCGCAGTTTTCGCAAGGGAGTCGCTATGCATATCTTGCTCCACCAACACACTTATCCAATTTGTTATAG 879 0.3868 MSRSFDSIKDINDEKELWKLAVRIEDIWKTGVGKLEHLEFLILDKQGDNIQVMLPNDLCPLWEPKLKEGSTYVISNFRVQPNDFKVKLCDHPFNLVMVGGEGGTVLTPTELPKIPKYRLNFIPFSEIKRGNYKPGLLVDVIGAVYEVPPPRVNIGSKKFPTNFSISDTNMNILTCALWGKYGTEFLDNYSQSSGGGPVIVIIKHAQIKEAQGNYDLTISNAWSGTKIMMDPELPEIKDFITSLPDDFVAQTQSASNNITGSSQLQQISNGSQFSQGSRYAYLAPPTHLSNLL 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre4g03695 292 SUPERFAMILY Nucleic acid-binding proteins 4 96 IPR012340 -
Trre4g03695 292 Gene3D - 113 248 IPR012340 -
Trre4g03695 292 CDD RPA1_DBD_A_like 19 93 - -
Trre4g03695 292 CDD RPA1_DBD_B_like 139 244 - -
Trre4g03695 292 Pfam Domain of unknown function DUF223 41 133 IPR003871 -
Trre4g03695 292 Gene3D - 3 100 IPR012340 -
Trre4g03695 292 SUPERFAMILY Nucleic acid-binding proteins 119 247 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre4g03695 Trre-Chr4 44627382 44628689 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre4g03695 8 239 Core DNA Replication Machinery Family AT5G45400 25.000 1.03e-07 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre4g03695 - - lang:109343677 195.282