Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre4g03687 ATGAACGAATTTGCAGAGACTCACAAACGCGAAGCTGATTCAGAAAACAAGGAGGAAATTTCTGCATCGAAGAAGTTAAGGGTTGAATCTTCGGAAGAAAATGCTTCAAAAGAAGTATCTTTTCTCATTGAAGCGGATGCTGCTGAAGATAAAGGCTTGAGACATTCTATGGAAGATGAATGGGTTGTTCTTCTCGATGCTGCTCGAGATTACCCTGGAAACTTGAGGTGTGCTCACTTTGCAATTTATGATGGACATGGGGGCCGGTTAGCTGCAGAATATGCTCAAAAGCATTTGCATGGAAATGTTCTCGCAGCAGGATTACCACGTGAGTTGTTGGATGTAAAAACTGCTAAAAGATCTATACTTGATGGTTTTCGAAAAACTGATGAGTCTCTTCTTCGAGAAAGTGCTGAAGGGGGATGGCAGGACGGTGCTACAGCCGTATGTGTCTGGGTATTGGGACAAAAAGTTTTTGTCGCAAATGTAGGAGATGCCAAAGCAGTTTTAGCTCGGGCAACTTTATCTGATGGATCCCAGGATAACTCAGATAAAGTACCTGCTCTCAAGGCCATTGTTTTGACAAGAGAACACAAACCTATATTCCCACAGGAGCGAGCACGCATTCAGAAGGCTGGTGGTGTTGTGAGCTCAAATGGACGATTACAAGGGCGTATAGAAGTATCTAGGGCTTTCGGAGATCGCCAGTTCAAAAAGGTGGGTCTTGTTGCAACCCCAGATATCCATTCTTTTGACCTTACTGATAGAGATCATTTCATCATTCTTGGTTGTGATGGATTGTGGGGGGTATTTGGACCCAGTGATGCTGTTGATTTTGTTCAGAAGTTATTGAATGAGGGGCTGCCTGTAACAACTGTGAGCCGCCGTCTTGTAAAGGAAGCTGTTCGTGAGCGTCGCTGCAAAGATAACTGTACTGCAATTGTCATTGCATTCAAGCGTAATTAA 966 0.4379 MNEFAETHKREADSENKEEISASKKLRVESSEENASKEVSFLIEADAAEDKGLRHSMEDEWVVLLDAARDYPGNLRCAHFAIYDGHGGRLAAEYAQKHLHGNVLAAGLPRELLDVKTAKRSILDGFRKTDESLLRESAEGGWQDGATAVCVWVLGQKVFVANVGDAKAVLARATLSDGSQDNSDKVPALKAIVLTREHKPIFPQERARIQKAGGVVSSNGRLQGRIEVSRAFGDRQFKKVGLVATPDIHSFDLTDRDHFIILGCDGLWGVFGPSDAVDFVQKLLNEGLPVTTVSRRLVKEAVRERRCKDNCTAIVIAFKRN 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre4g03687 321 Pfam Protein phosphatase 2C 48 306 IPR001932 -
Trre4g03687 321 SMART PP2C_4 33 316 IPR001932 -
Trre4g03687 321 CDD PP2Cc 48 318 IPR001932 -
Trre4g03687 321 MobiDBLite consensus disorder prediction 1 36 - -
Trre4g03687 321 SUPERFAMILY PP2C-like 41 319 IPR036457 -
Trre4g03687 321 PANTHER PROTEIN PHOSPHATASE 2C 26 316 IPR015655 GO:0004722|GO:0006470
Trre4g03687 321 Gene3D - 23 320 IPR036457 -
Trre4g03687 321 FunFam Probable protein phosphatase 2C 67 32 320 - -
Trre4g03687 321 MobiDBLite consensus disorder prediction 1 34 - -
Trre4g03687 321 ProSiteProfiles PPM-type phosphatase domain profile. 44 318 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre4g03687 Trre-Chr4 44471156 44477439 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre4g03687 41 270 PP2C-type Phosphatase Gene Family AT1G18030 74.348 6.50e-130 371
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre4g03687 K17500 - mnt:21396468 494.197