Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre4g03686 ATGGGAAGTATTATGACAGAAAAAGTGAAGCTTCTTGTGGCATTACTTGCTCTACAATTTTGTTTTGCAGGATTTCACATTGTCTCTAGACTTGCACTAAACATTGGTGTTAGCAAAGTTGTTTACCCTATTTATAGAAATTTAATTGCATTGCTTATGTTGAGTCCACTTGCTTACTTTTTAGAAAAGGATCAAAGACCACCCCTTACTCTATCTTTGTTGGTTCAATTTTTCCTATTGGCATTATTGGGGATCACTGCAAACCAAGGATTTTATTTGTTGGGTTTATATTATGCTTCTCCTACTTTTGCTTCTGCAATGCAAAACTCAGTTCCTGCCATCACTTTCATCTTGGCCTCAGCTTTAAGACTTGAGGAAACCAACATTGCAAGGAGAGATGGATTAGCAAAAATTGTAGGAACCATTGCAAGTGTAGGAGGTGCCACAATAATTACCCTTTACAAAGGTCCTCCTCTTCTTCACCTTCAAATGGATCAAATACAAGAAGAAAATACCTTAAAAATAGATGAGTCTTCAACAAACATGCAAAATTGGACTTGGGGTTGCATTTACTTGCTTGGACATTGTTTATCATGGGCTGGCTGGATAGTTTTTCAGGCTCCTGTGGTGAAGAAGTATCCAGCTAAACTCACACTGACTTCATTTACATGTTTCTTTGGATTGATCCAATTCTTGATCATAGCAGCCTTCACAGAAAATGATTTTGAAAAGTGGAAGATTCAATCATCAGAGGAGCTTTTTACCATCCTATATGCAGGAATTGTAGCATCGGGCATTGTCATATCTCTCCAAACATGGTGTATTCAAAAAGGTGGTCCTGTCTTTGTTGCTGTTTTCCAACCAATACAAACTTTTCTAGTTGCTGTCATGGCTGCACTTATTCTTGGAGATCAATTATACTTAGGAGGGATTATTGGTGCAATTCTCATTGTGCTTGGTCTATACTTAGTTCTATGGGGTAAAACCAACGAAAAAAAGGCGAATGAGCTATCGTTAACCAAGCCGTTGCTTGATTCAAACGAAGAGAAAAAAATTACTAACGCAGCTTCAAAAGACATACCTTAA 1086 0.3757 MGSIMTEKVKLLVALLALQFCFAGFHIVSRLALNIGVSKVVYPIYRNLIALLMLSPLAYFLEKDQRPPLTLSLLVQFFLLALLGITANQGFYLLGLYYASPTFASAMQNSVPAITFILASALRLEETNIARRDGLAKIVGTIASVGGATIITLYKGPPLLHLQMDQIQEENTLKIDESSTNMQNWTWGCIYLLGHCLSWAGWIVFQAPVVKKYPAKLTLTSFTCFFGLIQFLIIAAFTENDFEKWKIQSSEELFTILYAGIVASGIVISLQTWCIQKGGPVFVAVFQPIQTFLVAVMAALILGDQLYLGGIIGAILIVLGLYLVLWGKTNEKKANELSLTKPLLDSNEEKKITNAASKDIP 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre4g03686 361 SUPERFAMILY Multidrug resistance efflux transporter EmrE 45 153 - -
Trre4g03686 361 Pfam EamA-like transporter family 14 151 IPR000620 GO:0016020
Trre4g03686 361 Pfam EamA-like transporter family 187 325 IPR000620 GO:0016020
Trre4g03686 361 SUPERFAMILY Multidrug resistance efflux transporter EmrE 245 329 - -
Trre4g03686 361 PANTHER WAT1-RELATED PROTEIN 12 338 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre4g03686 Trre-Chr4 44464213 44468253 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre4g03686 4 358 Nodulin-like Gene Family AT3G18200 66.575 1.17e-174 489
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre4g03686 - - gmx:100812601 564.303