Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre4g03682 ATGCCGACGGTTGCCGTTAAACTCTACAGCGTATTCTTCAAGTTTCTGTTAAAACACCGTTTACAAACCCGGATCCAAACTCCATCCGACGAATCCGACCCGTTTGGTATAACTTCTCGACCCGACGAATCTACAGCGTCGTCAAATCCATCTTTTACCGACGGTGTTGCAACAAAAGACATTCACATCGATTCTTTCACTTCTCTTTCGATTCGAATCTTTCTCCCTGAATCAGCTTTATCAAATCCCGAACCTAATTCCAAACCTAAACGAAAACCCGATCCTAAAGGATCTGTAAACGGAAATGCAGCAACGGCGACGGGTTCGCCGAAGATTAATGTACGGCGGAATAGTTACGGTCCGTCTGGTTTTCCGATGAAGGAGACGCCGACGACGAGGAGGAATAGTGTTGGTGGTGATCCGGATTTGAATTTGATGTCTGGTGGTAGTTATGGCGGTTATTCACCGACGATGGATGATCGGAAGAGGAAGTTACCGGTGATGGTGCAGTTTCATGGTGGTGGTTGGGTGAGTGGGAGTAATGATTCGGTTGCGAATGATTTTTTTTGTAGAAGGATTGCGAAATTGTGTGATTCGGTTGTTGTGGCAGTTGGTTATCGGTTAGCGCCCGAGAGTAGGTATCCGGCAGCTTTCGAGGATGGATTTAAGGTTTTGAATTGGTTGGCGAAACAAGCGAATTTGGCGGAGTGTAGTAAGTCTTTGGGGATTAAGAAATTGGATGGTGGTCATAAACATATTGTTGATTCTTTTGGTGCTTCTATGGTTGAACCTTGGTTGGCTGCTCATGGAAATCTATCAAGGTGTGTTCTTCTTGGCGTGAGTTGTGGAGCAAATATTGCAAACTATGTAGCTCGAAAAGCTGTAGAAACAGGCAAACTTCTGGACCCTGTCAAGGTGGTTGCACAAATCCTGATGTATCCGTTTTATGTTGGAAGTGTGCCCACACATTCTGAAATAAAGTTGGCAAACTCTTATTTTTATGACAAGGCAATGTGTATGCTGGCATGGAAACTATTCCTACCCGAGAAAGAATTTAGCCTAGACCATCCAGCCGCCAATCCCCTAGTTCCAGGCCACGGTCCTCCTTTAAAGCTAATGCCTCCAACATTAACAGTGGTAGCGGAACATGACTGGATGAGAGACCGTGCCATAGCTTACTCGGAGGAGCTTAGGAAAGTCAATGTTGATGCACCTGTTCTTGAATATAAAGACGCAGTCCATGAATTTGCTACACTTGACGTACTTCTCAGAAGCCCTCAGGCTCAGGTTTGTGCTGAGGACATTGCCATTTGGGTCAAGAAGTATATATCACTTCGAGGTCATGAATTCTCATATTGA 1359 0.4503 MPTVAVKLYSVFFKFLLKHRLQTRIQTPSDESDPFGITSRPDESTASSNPSFTDGVATKDIHIDSFTSLSIRIFLPESALSNPEPNSKPKRKPDPKGSVNGNAATATGSPKINVRRNSYGPSGFPMKETPTTRRNSVGGDPDLNLMSGGSYGGYSPTMDDRKRKLPVMVQFHGGGWVSGSNDSVANDFFCRRIAKLCDSVVVAVGYRLAPESRYPAAFEDGFKVLNWLAKQANLAECSKSLGIKKLDGGHKHIVDSFGASMVEPWLAAHGNLSRCVLLGVSCGANIANYVARKAVETGKLLDPVKVVAQILMYPFYVGSVPTHSEIKLANSYFYDKAMCMLAWKLFLPEKEFSLDHPAANPLVPGHGPPLKLMPPTLTVVAEHDWMRDRAIAYSEELRKVNVDAPVLEYKDAVHEFATLDVLLRSPQAQVCAEDIAIWVKKYISLRGHEFSY 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre4g03682 452 Pfam alpha/beta hydrolase fold 168 417 IPR013094 GO:0016787
Trre4g03682 452 MobiDBLite consensus disorder prediction 124 138 - -
Trre4g03682 452 PANTHER ARYLACETAMIDE DEACETYLASE 44 417 - -
Trre4g03682 452 Gene3D alpha/beta hydrolase 152 446 IPR029058 -
Trre4g03682 452 MobiDBLite consensus disorder prediction 79 146 - -
Trre4g03682 452 MobiDBLite consensus disorder prediction 100 116 - -
Trre4g03682 452 MobiDBLite consensus disorder prediction 27 56 - -
Trre4g03682 452 MobiDBLite consensus disorder prediction 27 55 - -
Trre4g03682 452 SUPERFAMILY alpha/beta-Hydrolases 51 443 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre4g03682 Trre-Chr4 44404314 44407823 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre4g03682 1 452 Carbohydrate Esterase AT3G27320 70.346 0.0 644
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre4g03682 - - gmx:100791894 706.057