Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre4g03620 ATGAAAGCTGGGGAGCGAGCGTTGCTGCGTGTGAGCTGGGAATTAGGATATGGAAAGGAAGGAAGTTTTTCTTTTCCCAATGTTCCACCCATGGCAAATTTAGTTTATGAAGTTGAGCTCATTGGTTTTGATGAAACAAAAGATGGAAAAGCTCATAGTGATATGACAGTGGAGGAGAGGATTGGTGCAGCTGATCGAAGAAAGAAGGACGGAAATGCTCTGTTTCAGGAAAATAAATTAGAGGAGGCCATGCAACAGTATGGAATGGCCATAGCTTATATGGGAGATGACTTCATGTTCCAGTTATATGGGAAGTATAGAGATATGGCATTGGCTGTAAAGAATCCGTGCCATCTTAACACGGCAGCCTGTCTGATAAAGCTGAACCGATACGAAGAAGCTATAGGACAATGCAGCATTGTTTTTGCAGGATCAGTTTATGATTTATTTGTATACACATTCCTTTAA 468 0.4124 MKAGERALLRVSWELGYGKEGSFSFPNVPPMANLVYEVELIGFDETKDGKAHSDMTVEERIGAADRRKKDGNALFQENKLEEAMQQYGMAIAYMGDDFMFQLYGKYRDMALAVKNPCHLNTAACLIKLNRYEEAIGQCSIVFAGSVYDLFVYTFL 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre4g03620 155 Gene3D - 1 45 IPR046357 GO:0003755
Trre4g03620 155 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 1 41 IPR001179 GO:0003755
Trre4g03620 155 SUPERFAMILY TPR-like 54 140 IPR011990 GO:0005515
Trre4g03620 155 Gene3D Tetratricopeptide repeat domain 46 145 IPR011990 GO:0005515
Trre4g03620 155 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 1 44 IPR001179 GO:0003755
Trre4g03620 155 SUPERFAMILY FKBP-like 1 52 - -
Trre4g03620 155 PANTHER ARYL HYDROCARBON RECEPTOR INTERACTING PROTEIN RELATED 1 141 IPR039663 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre4g03620 Trre-Chr4 43590611 43591444 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre4g03620 1 142 Calmodulin-binding Proteins AT3G25230 35.664 1.72e-19 82.4