Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre4g03610 ATGTTCATGATTCAGTCCTGTAATATTGTAGGATTTGTAGCCATCTCCACCCTCTTATTCATATACATCCACTATTCGAGACGCAATAGAGATAAAATTGTTTCGAGTTGGCCAATAATTTGTATGCTACCGGCAATTCTGCGTTATGCGTCCGATTTCCATGATTTTACGACATTAGTTTTGAAACATCATGGAGGAACTTTTCGATTCGAAGGTCCCTGGTTCACAAACACAAGTTTTGTTGGCACCTCTGATCCAAAGAACATCGATCACATCACAAACACGAATTTTGGCAACTACGGAAAAGGATCGAACTTCAAAGAAATTCTTGAAGTTCTTGGAGGTAGTATTTTAAATTCTGATTTCCATGACTGGAAACAAGAGAGGATAGTGAATCAGTTAATTTTCAAAAGGAAAAACTTTAAGAACTTCTGCCTCCAATCAGTTCAGAAGAAGTTGGAGAACTGCCTACTACCGTTTCTTAACGATGTATCCGAAGCCGGAGCTCAGCTGGACTTGCAAGATGTCTTTAGTAGGCTGACCTTTGACATAACATGCACCATTGCATTTGGATTTGATCCTAATTGTCTTTCAAAAAAGTTTAATGAGCTTAGAGAAATTGCTTGTCTAAAATCTCTTCCAGTGATGGAGGAAGTGATATTTTACCGACACTTCATTCCGATTTATTTTCGGAAGCTGCAGAAATGGCTCAATGTTGGTCAAGAAAAAAAGTTCAAACTAGCCCAAGAAAATATCGACCGGTTTTTGTACGAATGTATGAGTACATATTCAAGCAGACACAATGAAGAAACGGACGAATGTTATTTCGACTTGGTAAAAGAATTGACGAAAGAAGGATATGGAAGGGGGGAAATGAGCGAGAAGTATATCAGAGACACCGCACTCTCTCTTCTAATAGCCGGAAATGGAACAATTAGTTCAGGTCTCAGTTGGTTTTTTTGGCTTGTCTCAACGCATCCCGTTGTACAAGCCAAAATTATTCAAGAGATTAAAAATAATTGCTTCACTGATCAATACGAAAATTGTATTGCTTCAAGGGAACAAGATCTCGACAAGCTAGTTTACCTTCATGGAGCTTTATACGAAGCATTGAGGCTTTATCCTCCTATACCTTTCGAGCATATTTGGTCTGTCAAATCCGATATACTACCTAGTGGCGACCATGTTAGTCAAAATACGATGTTAATGTACTCTTTGTATGCGATGGGAAGAATGAAACAAATATGGGGAGAAGATTACATGGAATTTAAGCCGGAGAGATGGATATCAGATCGAGGAGATATTATACATGTTCCATCTAATAAGTTCATAGCTTTCAATACAGGTCCTAGAAGTTGTTTGGGTAAAGATATTAGTCTCTTTCAAATGAAGATGATTGCAACTGCTATACTATGGAAGTTTCAAATACAGGTTGTGAAAGATCACCTTGTAATGCCAAGAATTTCGATTATTCTCCGTATGAAACATGGCTTGAAAGTTGAAGTTACTAAAAGAGACATTTGA 1524 0.3773 MFMIQSCNIVGFVAISTLLFIYIHYSRRNRDKIVSSWPIICMLPAILRYASDFHDFTTLVLKHHGGTFRFEGPWFTNTSFVGTSDPKNIDHITNTNFGNYGKGSNFKEILEVLGGSILNSDFHDWKQERIVNQLIFKRKNFKNFCLQSVQKKLENCLLPFLNDVSEAGAQLDLQDVFSRLTFDITCTIAFGFDPNCLSKKFNELREIACLKSLPVMEEVIFYRHFIPIYFRKLQKWLNVGQEKKFKLAQENIDRFLYECMSTYSSRHNEETDECYFDLVKELTKEGYGRGEMSEKYIRDTALSLLIAGNGTISSGLSWFFWLVSTHPVVQAKIIQEIKNNCFTDQYENCIASREQDLDKLVYLHGALYEALRLYPPIPFEHIWSVKSDILPSGDHVSQNTMLMYSLYAMGRMKQIWGEDYMEFKPERWISDRGDIIHVPSNKFIAFNTGPRSCLGKDISLFQMKMIATAILWKFQIQVVKDHLVMPRISIILRMKHGLKVEVTKRDI 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre4g03610 507 Pfam Cytochrome P450 37 482 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre4g03610 507 PRINTS P450 superfamily signature 444 453 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre4g03610 507 PRINTS P450 superfamily signature 307 324 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre4g03610 507 PRINTS P450 superfamily signature 453 464 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre4g03610 507 PRINTS P450 superfamily signature 365 376 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre4g03610 507 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 446 455 IPR017972 GO:0005506|GO:0016705
Trre4g03610 507 SUPERFAMILY Cytochrome P450 24 505 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre4g03610 507 Gene3D Cytochrome P450 26 506 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre4g03610 507 PRINTS E-class P450 group I signature 443 453 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre4g03610 507 PRINTS E-class P450 group I signature 316 342 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre4g03610 507 PRINTS E-class P450 group I signature 453 476 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre4g03610 507 PRINTS E-class P450 group I signature 296 313 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre4g03610 507 PANTHER CYTOCHROME P450 23 500 - -
Trre4g03610 507 CDD CYP86A 68 498 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre4g03610 Trre-Chr4 43503118 43504641 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre4g03610 13 505 Cytochrome P450 AT2G23180 42.270 1.95e-139 410
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre4g03610 - - gmx:100791312 598.201