Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre4g03584 ATGGGGTCTCAAGGTGGAACAGTTCAAGCGTCAAGGACTACACCTTTATCTAGGTCAGGATCTTTGTATAATCTAACCCTTGATGAAGTACAAAACCATCTTGGGAATTTAGGGAAGCCACTTGGAAGTATGAATCTTGATGAGTTACTTAAGAGTGTGTGGAGTGTTGAAGCCGGTGAAGTTTCTGATTTCGGTAACGATGTTGCTGGTACTAACATGCAGCATAATCAACTTGGTGAGATGAATCGACAGGGAAGTTTAACATTATCTGGAGATCTTAGAAAGAAAACTGTTGATGAGGTGTGGAGAGATATGCAAGTAAAAAAGAAGAGGAGTGTTGATAGGGATCAGAAAGCGCGTGACAGACAACAAACACTTGGTGAGATGACTTTGGAGGATTTCTTGGTGAAAGCTGGAGTTGGTGGTGAATCTTTTCATAATAAGGAAGGTGATTTGTTAAGGGTTGATTCGAATGAGGATTCTCGGCAAAATGTTTCACAACACGGTCATCACTGGATGCAATTTCAGCTTCCTTCGGTGCAGCAGCAGCAACAGCATCAACAAGAGATGATGCCGGGATTTGTGGCTGTTCATGCCATTCAACAGCCTTTTCAGGTTGCAGGGCAAGTTTTGGATGCGGCAATCTCACCGTCTTCTTTAATGGGTTCATTGTCAGATACACAAACACTAGGTCGAAAAAGGGTTGCCTCTGGTATAGTTGTAGAGAAAACTGTGGAGAGGAGGCAAAAGAGGATGATTAAAAATAGGGAATCTGCTGCTCGGTCACGAGCAAGAAGACAGGCTTACACACAAGAACTGGAACTTAAAGTTTCACGTTTGGAAGCGGAAAATGAAAGGCTTAGGAAACAGAATGAGATAGAGAAAGAGGTTCCATGTGCGCCGCCACCCGAGCCTAAGAATCAACTCCGCAGAACTAATTCGGCATCATTTTGA 954 0.4329 MGSQGGTVQASRTTPLSRSGSLYNLTLDEVQNHLGNLGKPLGSMNLDELLKSVWSVEAGEVSDFGNDVAGTNMQHNQLGEMNRQGSLTLSGDLRKKTVDEVWRDMQVKKKRSVDRDQKARDRQQTLGEMTLEDFLVKAGVGGESFHNKEGDLLRVDSNEDSRQNVSQHGHHWMQFQLPSVQQQQQHQQEMMPGFVAVHAIQQPFQVAGQVLDAAISPSSLMGSLSDTQTLGRKRVASGIVVEKTVERRQKRMIKNRESAARSRARRQAYTQELELKVSRLEAENERLRKQNEIEKEVPCAPPPEPKNQLRRTNSASF 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre4g03584 317 SMART brlzneu 243 311 IPR004827 GO:0003700|GO:0006355
Trre4g03584 317 Pfam bZIP transcription factor 247 292 IPR004827 GO:0003700|GO:0006355
Trre4g03584 317 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 250 265 IPR004827 GO:0003700|GO:0006355
Trre4g03584 317 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 245 290 IPR004827 GO:0003700|GO:0006355
Trre4g03584 317 SUPERFAMILY Leucine zipper domain 247 294 IPR046347 GO:0003700|GO:0006355
Trre4g03584 317 Gene3D - 245 298 - -
Trre4g03584 317 FunFam ABSCISIC ACID-INSENSITIVE 5-like protein 2 245 297 - -
Trre4g03584 317 Coils Coil 270 297 - -
Trre4g03584 317 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 16 315 IPR043452 GO:0003700|GO:0045893
Trre4g03584 317 MobiDBLite consensus disorder prediction 287 317 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre4g03584 Trre-Chr4 43115811 43118496 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre4g03584 1 317 bZIP Transcription Factor Family AT3G56850 56.832 2.31e-104 305
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Trre4g03584 bZIP_1 6.7e-13 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre4g03584 K14432 - gmx:100170741 361.688