Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre4g03577 ATGCATGTTCTGCTTCAATCTTCTGCTCCACAATGTGTGAGCCTTTCCTCTCTTCCATCAGTCCCTTTGTTGTCTCATAATCATGCATTGAAGACCAATTCTCATTATCGAAAGATTGGTCGCGATGTTATCGTAATGGCAACAGGAGATGCACCAGCAGAAACTGAGGTGCCTGAGTTTGTTAAGACTCTTCAAGATGCTTGGGACAAAGTTGATGATAAATATGCAGTGGGTTCATTGGTTGTGGCTAGTGTGATTGCACTATGGGGCTCAACTGGTTTGATCTTAGTGGGAATGGAAGAAGGATTAGATTGTAGGCTCCTGTTTTTAGTGAAGATGCTAAATATTACATGGGTCAGCCTTCACCCACATGAGATATCTTTCAAGGACATTGACAAAGTTGCCAAGACCTCATTTCCTTTGTGCATGCGTCACCTATTTGATAAGGTTAGAGATCAGTCATAA 465 0.4194 MHVLLQSSAPQCVSLSSLPSVPLLSHNHALKTNSHYRKIGRDVIVMATGDAPAETEVPEFVKTLQDAWDKVDDKYAVGSLVVASVIALWGSTGLILVGMEEGLDCRLLFLVKMLNITWVSLHPHEISFKDIDKVAKTSFPLCMRHLFDKVRDQS 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre4g03577 154 Pfam Eukaryotic and archaeal DNA primase, large subunit 125 153 IPR007238 GO:0006269
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre4g03577 Trre-Chr4 42976856 42978677 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre4g03577 125 152 Core DNA Replication Machinery Family AT1G67320 71.429 1.42e-08 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre4g03577 - - aprc:113849332 121.709