Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre4g03576 ATGCATGTTCTGCTTCAATCTTCTGCTCCACAATGTGTGAGCCTTTCCTCTCTTCCATCAGTCCCTTTGTTGTCTCATAATCATGCATTGAAGACCAATTCTCATTATCGAAAGATTGGTCGCGATGTTATCGTAATGGCAACAGGAGATGCACCAGCAGAAACTGAGGTGCCTGAGTTTGTTAAGACTCTTCAAGATGCTTGGGACAAAGTTGATGATAAATATGCAGTGGGTTCATTGGTTGTGGCTAGTGTGATTGCACTATGGGGCTCAACTGGTTTGATCTTAGTGGGAATGGAAGAAGGATTAGATTGTAGGCTCCTGTTTTTAGTGAAGATGCTAAATATTACATGGGTCAGCCTTCACCCACATGAGATATCTTTCAAGGACATTGACAAAGTTGCCAAGACCTCATTTCCTTTGTGCATGCGTCACCTATTTGATAAGCTGGAAGAGGACCATCATTTAAAGCATGGTGGGAGGATGCAACTAGGCCTCTTTCTCAAGGTGCAAACAAACAGAAAGAGAGATTTTGTGTATATTGTCATTCCTATGTGGCCTAAAGGTGTTCCTTCAAGTACAACTATGCAACAAATTCTCTTTTGGCAGGTTGAGGTTTCCACTACTGGTATTCAACTTCACCAACAAATGAGGTACATGCATGCATGCATGATATATCTTTTCCAAACCAAAATAAAGAATGAATACAGTGGCTTCATGAAATTGTGA 729 0.4102 MHVLLQSSAPQCVSLSSLPSVPLLSHNHALKTNSHYRKIGRDVIVMATGDAPAETEVPEFVKTLQDAWDKVDDKYAVGSLVVASVIALWGSTGLILVGMEEGLDCRLLFLVKMLNITWVSLHPHEISFKDIDKVAKTSFPLCMRHLFDKLEEDHHLKHGGRMQLGLFLKVQTNRKRDFVYIVIPMWPKGVPSSTTMQQILFWQVEVSTTGIQLHQQMRYMHACMIYLFQTKIKNEYSGFMKL 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre4g03576 242 PANTHER DNA PRIMASE LARGE SUBUNIT 124 169 IPR007238 GO:0006269
Trre4g03576 242 Pfam Eukaryotic and archaeal DNA primase, large subunit 125 205 IPR007238 GO:0006269
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre4g03576 Trre-Chr4 42976856 42982535 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre4g03576 56 169 Core DNA Replication Machinery Family AT1G67320 42.857 9.31e-21 88.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre4g03576 - - aprc:113849332 121.709