Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre4g03551 ATGGAAGATCAACAACAAAAACAGCATGTTCAGTCTCAAAGTTCCAATACCAATAATCCAAACAACACTGAAAAGAGCGAAATTGTGAGATCAAGATGGTCACCAAAACCTGAACAAATCCTTATACTTGAATCCATCTTTAATAGTGGAATGGTTAATCCACCAAAAGATGAAACCGTTAGAATAAGAAAACTTCTAGAAGAGTATGGAGCTGTTGGCGATGCTAATGTTTTTTATTGGTTTCAAAATCGCCGCTCTCGCTCTAGGCGCCGTCAAAGGCAGATGCAGGCCGCCGCTCAACTAATTGGTGGTAGCAGTGTAAATCCATATCACCAATACCATTGCAACACCAATAGTACTAACACTCTGTCTCTTGGTGCTGCAATTGGTATCGGTGGTTCTTCAAATTTCACTATGAATTCTTCATCTTGTAATTCATCTTATAGTAATAAATTTTCGGGTTCATCATCATGCGGTGTTGGTATTGGTTTAGGTCTCAGTGTTGGCGGTGCAGGTAGCAGTCGCGGAGAACCAGGGTTTGGTGGTTTGCTCTTAGGTTCTACTCCAAATAATTTTTCTGGAATTGATCATAATTCAGCTGCTTCTTCAATTTTGTATCCTTCTGATCATGCTTCAAATCTCAACTTCCATTTAGGATTTGGGGGGAACAATGTTCCAGATGTGATCATAGTGTTCATCAATGGAGTTCCAACAGAAGTTCCAAGGGTTGCAATTGACATGAAATCAATGTTTGGTGAAAATGTTATGTTAGTTCATTCCTCTGGAGTCCCTGTTCCAACCAATGAGTTTGGTATCTTGATGCAGAGCTTGCAGCATGGTGAAAGCTACTTTTTGGTTTCAAAGCAAACCCAAGCTTGA 879 0.4005 MEDQQQKQHVQSQSSNTNNPNNTEKSEIVRSRWSPKPEQILILESIFNSGMVNPPKDETVRIRKLLEEYGAVGDANVFYWFQNRRSRSRRRQRQMQAAAQLIGGSSVNPYHQYHCNTNSTNTLSLGAAIGIGGSSNFTMNSSSCNSSYSNKFSGSSSCGVGIGLGLSVGGAGSSRGEPGFGGLLLGSTPNNFSGIDHNSAASSILYPSDHASNLNFHLGFGGNNVPDVIIVFINGVPTEVPRVAIDMKSMFGENVMLVHSSGVPVPTNEFGILMQSLQHGESYFLVSKQTQA 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre4g03551 292 MobiDBLite consensus disorder prediction 1 31 - -
Trre4g03551 292 SUPERFAMILY Homeodomain-like 25 98 IPR009057 -
Trre4g03551 292 PANTHER WUSCHEL-RELATED HOMEOBOX 11 1 289 IPR044558 GO:0003700|GO:0048830
Trre4g03551 292 MobiDBLite consensus disorder prediction 7 28 - -
Trre4g03551 292 ProSiteProfiles 'Homeobox' domain profile. 26 91 IPR001356 GO:0003677
Trre4g03551 292 FunFam WUSCHEL-related homeobox 11 30 97 - -
Trre4g03551 292 Gene3D - 30 98 - -
Trre4g03551 292 Pfam Homeodomain 30 90 IPR001356 GO:0003677
Trre4g03551 292 SMART HOX_1 28 95 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre4g03551 Trre-Chr4 42556095 42559442 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre4g03551 13 290 Wox Gene Family AT5G17810 47.586 1.33e-68 212
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Trre4g03551 Homeodomain 2.5e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre4g03551 - - aprc:113866574 270.781