Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre4g03550 ATGTTCTATTATAAGGTTTCATTATGTTTGGATGGAACATTACCTGATTACCACTTTCATCTCGGATCTAGATCGGGTGCAAATAGTTGGCTTATTCAATTAGAGGGATGGGGATGGTGTAACACCATCAGAAGTTGTGTATTTAGAAAAACTACTCGTCGTGGTTCCTCAAATCACATGGAAAAGCAACTACCATTCACAGGGATACTGAGCAATAAAGCTGAAGAAAATCATGGGGACGCTACTTTAAGTTCACCTTAG 261 0.3908 MFYYKVSLCLDGTLPDYHFHLGSRSGANSWLIQLEGWGWCNTIRSCVFRKTTRRGSSNHMEKQLPFTGILSNKAEENHGDATLSSP 86
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre4g03550 86 Pfam Pectinacetylesterase 7 77 IPR004963 GO:0016787
Trre4g03550 86 MobiDBLite consensus disorder prediction 55 86 - -
Trre4g03550 86 PANTHER NOTUM-RELATED 7 77 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre4g03550 Trre-Chr4 42536375 42538046 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre4g03550 7 77 Carbohydrate Esterase AT3G05910 78.873 1.13e-36 123