Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre4g03547 ATGGAAGATCAAGAACAAAAGCAACATGTTCAGTCTCAAAGTTCCAATACCAATAATCCAAACAACACTGAAAAGAGTGAAACTGTGAGATCAAGATGGACACCAAAACCTGAACAAATTCTTATACTTGAATCCATTTTCAATAGTGGAATGGTTAATCCACCAAAAGATGAAACAGTTAGAATAAGAAAACTTCTTGAAAAATTTGGTGCTGTTGGTGATGCTAATGTTTTTTATTGGTTTCAGAATCGTCGCTCTCGCTCTCGTCGCCGTCAAAGGCAGATGCAGGCCGCCGCTCAACTAAGCGGTGACACTGCAAATCCATATCACCAATACCAGTGTAGCACCAATAGTGCTAACACTCTGTCTCTTGGTGCTGCAATTGGTTTTGGTGATTCATCTAATTTCACTATGAATTCTTCTTCTTGTAATTCATCTTATAATAATAACTTTTCCGGTTCTTCTTCATCATGTGGTCTTGGAGTCGGTCTCGGCGTCGGTATTTGCGGTGGCGGAGAAGAAGGGTTTGGTGGTTTGTTCTTAGGTTCTACTCCAATTAATTTCCATGAATCTGATCATACCTCAGCTGCTTCATCAGTTTTGTACCCTTCTAATCATGCTTCAAATTTCAACATCCATTCAGGATTTGGGGGGAGCAATGTTTCAAGTTTGATCACAGTGTTGATCAATGGAGTTGCAACAGAAGTTCCAAGGGGCACAATTAACATGAAAACAATGTTTGGTGAAGATGTTATGTTAATTCATTCCTCTGGAGTCTCAGTTCCAACCAATGAGTTTGGTTTCTTGATGCAGAACTTGCAACATGGTGAAAGCTATTATCTGGTTTCAAAGCAAACCCAGGCATGA 867 0.3979 MEDQEQKQHVQSQSSNTNNPNNTEKSETVRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLEKFGAVGDANVFYWFQNRRSRSRRRQRQMQAAAQLSGDTANPYHQYQCSTNSANTLSLGAAIGFGDSSNFTMNSSSCNSSYNNNFSGSSSSCGLGVGLGVGICGGGEEGFGGLFLGSTPINFHESDHTSAASSVLYPSNHASNFNIHSGFGGSNVSSLITVLINGVATEVPRGTINMKTMFGEDVMLIHSSGVSVPTNEFGFLMQNLQHGESYYLVSKQTQA 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre4g03547 288 Gene3D - 30 98 - -
Trre4g03547 288 MobiDBLite consensus disorder prediction 1 33 - -
Trre4g03547 288 SUPERFAMILY Homeodomain-like 24 98 IPR009057 -
Trre4g03547 288 ProSiteProfiles 'Homeobox' domain profile. 26 91 IPR001356 GO:0003677
Trre4g03547 288 MobiDBLite consensus disorder prediction 8 28 - -
Trre4g03547 288 FunFam WUSCHEL-related homeobox 11 30 97 - -
Trre4g03547 288 Pfam Homeodomain 30 90 IPR001356 GO:0003677
Trre4g03547 288 PANTHER WUSCHEL-RELATED HOMEOBOX 11 8 285 IPR044558 GO:0003700|GO:0048830
Trre4g03547 288 SMART HOX_1 28 95 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre4g03547 Trre-Chr4 42490872 42494724 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre4g03547 13 286 Wox Gene Family AT5G17810 49.650 3.74e-71 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Trre4g03547 Homeodomain 1.2e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre4g03547 - - lang:109335690 278.485