Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre4g03544 ATGATATTCTTCTTTGTTCTTCCTTTCTCATTGGCTCAACTAAGGTTTGGCTATTATAGCTTTACATGTCCATTAGCAAATGAAATTGTAAGTGAGGCTGTGCAAAACTATTACCAAAGTGATATAACCATTGTTGGTGCCTTGATTCGTTTGCACTTTCATGATTGTATTTCCAATGGTTGTGACGCTTCAATACTAATAGATTCAACAGAAAATAGAAAATCAGAGAAAGATGCAAGACCAAACCAAACGCTACGAGGATTTGACCTAATTGACGACATCAAGAGTACCTTAGAACAAGAATGCCCCGAAACCGTTTCGTGTGCAGATATCATAACAATGGCCACAAGGGAAGCAATTGCATTAGCAAATGGACCAAGATACCATGTCTTAACCGGAAGAAGAGATGGATTAGTATCAAATGCCTTAAATGTGACAATTCCTGGAACATCACTTAATGTGTCACAAGCTCTAAAAAAATTTACCTCAAAAGGGTTAACATTAGAAGACATGGTAACCCTTATTGGAGCACACACTATTGGTTTTTCTAAATGCAAATTTTTTCAAAATAGGCTATCAAGTTTTAGATCAGGAAGAATTGACCCTACAATGGATCCTAATTTAAATGCTTATTTGGTTGAAAAATGTGGTTCAATATTTAACCCTGCAGAGAATCATACTTCAGTGTTTTTGGATGAAGAAACACCTTTTGATTTTGACAATCAATTCTACAAACAAATTATTAATAGGAGAGGGATACTTCATATTGATCAACAACTTGCTTTGGATCCTATTTCTAGAGATTTGGTTTGGAATTTTGCAAGAGGTAATTTTAACTTTTGGGATAGATTTGGAGTTGCTTGGAGTAAGCTTGGAAGAATTGAAGTTTTAGTTGGCAATGAGGGTGAAATTAGAAGAAATTGCAGGGCTTTCAATCATGATATTTGA 948 0.3502 MIFFFVLPFSLAQLRFGYYSFTCPLANEIVSEAVQNYYQSDITIVGALIRLHFHDCISNGCDASILIDSTENRKSEKDARPNQTLRGFDLIDDIKSTLEQECPETVSCADIITMATREAIALANGPRYHVLTGRRDGLVSNALNVTIPGTSLNVSQALKKFTSKGLTLEDMVTLIGAHTIGFSKCKFFQNRLSSFRSGRIDPTMDPNLNAYLVEKCGSIFNPAENHTSVFLDEETPFDFDNQFYKQIINRRGILHIDQQLALDPISRDLVWNFARGNFNFWDRFGVAWSKLGRIEVLVGNEGEIRRNCRAFNHDI 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre4g03544 315 ProSitePatterns Peroxidases active site signature. 45 56 IPR019794 GO:0004601
Trre4g03544 315 Gene3D Peroxidase, domain 2 148 291 - -
Trre4g03544 315 PRINTS Plant peroxidase signature 86 99 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre4g03544 315 PRINTS Plant peroxidase signature 169 181 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre4g03544 315 PRINTS Plant peroxidase signature 246 263 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre4g03544 315 PRINTS Plant peroxidase signature 230 245 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre4g03544 315 PRINTS Plant peroxidase signature 286 299 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre4g03544 315 PRINTS Plant peroxidase signature 47 67 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre4g03544 315 PRINTS Plant peroxidase signature 124 139 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre4g03544 315 PRINTS Plant peroxidase signature 23 42 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre4g03544 315 PRINTS Plant peroxidase signature 105 115 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre4g03544 315 PRINTS Haem peroxidase superfamily signature 106 123 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre4g03544 315 PRINTS Haem peroxidase superfamily signature 124 136 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre4g03544 315 PRINTS Haem peroxidase superfamily signature 45 59 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre4g03544 315 PRINTS Haem peroxidase superfamily signature 170 185 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre4g03544 315 PRINTS Haem peroxidase superfamily signature 232 247 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre4g03544 315 ProSiteProfiles Plant heme peroxidase family profile. 13 312 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre4g03544 315 SUPERFAMILY Heme-dependent peroxidases 13 312 IPR010255 GO:0004601|GO:0006979|GO:0020037
Trre4g03544 315 CDD secretory_peroxidase 13 311 IPR033905 GO:0004601|GO:0042744
Trre4g03544 315 Pfam Peroxidase 31 275 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre4g03544 315 PANTHER - 8 312 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre4g03544 315 FunFam Peroxidase 17 160 - -
Trre4g03544 315 FunFam Peroxidase 148 291 - -
Trre4g03544 315 Gene3D - 17 312 - -
Trre4g03544 315 ProSitePatterns Peroxidases proximal heme-ligand signature. 170 180 IPR019793 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre4g03544 Trre-Chr4 42449123 42450534 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre4g03544 1 312 Peroxidase AT5G17820 50.479 1.94e-109 321
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre4g03544 K00430 - gmx:100816459 357.836