Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre4g03458 ATGGATTTCACATCAGGGAAGAATTCATCAGAGAACAATAACGCTGAAAACGCTAACCAAATCGTTGATTCTTCTTCTCAATTTGCATCTGATTCCTACAATGTCAAAGAAACTGAAGAGCGTCAAGCTCGTGAACTCAAAGCTGGTCTTCACCCTCTCAAGACCAAATTTGTATTTTGGTATACTCGTCGGGTACCTGGAATTCGAAATCAATCATATGAGGACAACATTAAGAAGATTGTTGAGTTCAGTACGGTTGAAGGATTTTGGGTCTCTTATTGCCATCTTGCTCGTCCTTCTGCTTTGCCTAGTCCAACAGATCTGCACCTTTTCAAAGAAGGAATTCGTCCTTTATGGGAGGACTCTGCTAACTGCAATGGTGGAAAATGGATTATACGATTCAAAAAGGCTGTCTCAGGTCGTTTTTGGGAGGATCTGGTGCTTGCCTTAGTGGGTGACCAATTAGATTATGGTGATAACATATGTGGTGCAGTACTAAGCATTCGGTTCAACGAGGATATAGTGAGTGTTTGGAATCGCAATGCATCTGATCATCAGGCTGTTATGGCTTTGAGAGATTCAATCAAGCGTCACTTGAAGCTTCCTCACGGCTATGTTATGGAGTACAAGCCCCATGATGCTTCTCTGAAAGACAATTCATCTTACAGGAATACTTGGTTGAGAGGCTAG 690 0.4203 MDFTSGKNSSENNNAENANQIVDSSSQFASDSYNVKETEERQARELKAGLHPLKTKFVFWYTRRVPGIRNQSYEDNIKKIVEFSTVEGFWVSYCHLARPSALPSPTDLHLFKEGIRPLWEDSANCNGGKWIIRFKKAVSGRFWEDLVLALVGDQLDYGDNICGAVLSIRFNEDIVSVWNRNASDHQAVMALRDSIKRHLKLPHGYVMEYKPHDASLKDNSSYRNTWLRG 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre4g03458 229 Gene3D RNA Cap, Translation Initiation Factor Eif4e 23 222 IPR023398 -
Trre4g03458 229 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED 31 219 IPR001040 GO:0003723|GO:0003743|GO:0006413
Trre4g03458 229 MobiDBLite consensus disorder prediction 1 33 - -
Trre4g03458 229 ProSitePatterns Eukaryotic initiation factor 4E signature. 107 130 IPR019770 GO:0003723|GO:0003743|GO:0005737|GO:0006413
Trre4g03458 229 SUPERFAMILY eIF4e-like 42 225 IPR023398 -
Trre4g03458 229 MobiDBLite consensus disorder prediction 1 34 - -
Trre4g03458 229 Pfam Eukaryotic initiation factor 4E 52 209 IPR001040 GO:0003723|GO:0003743|GO:0006413
Trre4g03458 229 FunFam Eukaryotic translation initiation factor NCBP 23 222 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre4g03458 Trre-Chr4 41564990 41568198 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre4g03458 19 229 Eukaryotic Initiation Factors Gene Family AT5G18110 78.404 7.35e-127 356
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre4g03458 K03259 - gmx:100499744 402.905