Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre4g03361 ATGAGCAGAACTTTGAGTGTTAAGGAGAATAAAAAGGAAAAGAAGTGGAAGATGCTTCAAGGAAAAGATCAATGGATCTTAGATTACTTCATGGATGGTCACTCTTGGTTTGGTAGGTGGGGCTATAAGTTCTATCGCGGAAGCTTTGGTGTGACAGAAGAAAACTACTATGAAGCAATGGAAATTCTTGGTTCATTAGTGCTTGATGATATTGTAAGAGATTTGAGTAAAAGATCAATGGATCTTAGATTACTTCATGGAGTTGCTTATGGTCACTCTTGGTTTGGTAGGTGGGGCTATAAGTTCTATCGCGGAAGCTTTGGTGTGACAGAAGAAAACTACTATGAAGCAATGGAAATTCTTGGTTCATTAGTGCTTGATGATATTGTAAGAGATTTGAGTAAGACAAAGTATCATAAAGATATCAAACAAATGATTCGTTTCTATAGAGATATGAGTGAAACTCGAATAGTCACAATAAGGGAACTTCTTAGATTCATGCTTAATATCTTATTAGAATGA 522 0.3563 MSRTLSVKENKKEKKWKMLQGKDQWILDYFMDGHSWFGRWGYKFYRGSFGVTEENYYEAMEILGSLVLDDIVRDLSKRSMDLRLLHGVAYGHSWFGRWGYKFYRGSFGVTEENYYEAMEILGSLVLDDIVRDLSKTKYHKDIKQMIRFYRDMSETRIVTIRELLRFMLNILLE 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre4g03361 173 PANTHER PHD FINGER PROTEIN MALE MEIOCYTE DEATH 1-RELATED 30 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre4g03361 Trre-Chr4 40089847 40090828 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre4g03361 20 85 PHD Transcription Factor Family AT5G22260 31.818 2.54e-06 44.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre4g03361 K26271 - gmx:100797388 147.132