Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre4g03347 ATGTGTATGACCATCGAAAATGAGCACCAGTTTTCATCATTTGCTGAAATTAATTCAACTAGGTCAAGTTGGAATTGTAGGGCAAAGATCATCCGACTTTGGCAAACTTCTAATTTCAATCGAAACACATTGCCTTTTTCTATTGAAATGGTTTTAATGGATTCTTATGGTGGTAGAATTCATGCTACAGTTAAAACAACTTTTATCTATAAATTTAAGGATGAACTAATAGAGGGAAAAGTTTATACTTTTGAAAAGATGGGGGTCTCACCTAATGTTGGAGCTTATCGTACTACTCATCACAATTTTAAGTTAAATTTCAAAGCCACTACATTGGTTCAAAGGCTTTTTAATCAAGACATTGTTAGATCTCCATATAACTTTGTTCCAATTGGACAGATTGTTGGAGGCTCTTATGACACTGATTTCTTAGTTGATGTTATTGGAATATTGATTGATGTTGGTCGTGAGCGTGAAATTAATGATCAAGATGGAGCGCCCACAAAAGTCAATGTCATTGAAATAGAGGAAGATGGGAGTAAGATTCAATGTTATTTGTATGGGGCATATGTTGATGTACTTAATGCTTTTCTTGGAGCTGGACATGTCCAAAATGTTGCTGTCGTTATGATGTTTGCCAAGGCCGTAGCTTTTCAAGGTTGTATAATCTTAAACTTTTTGTTTTCTATACTTTTGCTTTAA 702 0.3433 MCMTIENEHQFSSFAEINSTRSSWNCRAKIIRLWQTSNFNRNTLPFSIEMVLMDSYGGRIHATVKTTFIYKFKDELIEGKVYTFEKMGVSPNVGAYRTTHHNFKLNFKATTLVQRLFNQDIVRSPYNFVPIGQIVGGSYDTDFLVDVIGILIDVGREREINDQDGAPTKVNVIEIEEDGSKIQCYLYGAYVDVLNAFLGAGHVQNVAVVMMFAKAVAFQGCIILNFLFSILLL 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre4g03347 233 Gene3D - 9 115 IPR012340 -
Trre4g03347 233 CDD RPA1_DBD_B_like 146 230 - -
Trre4g03347 233 Pfam Domain of unknown function DUF223 49 144 IPR003871 -
Trre4g03347 233 Gene3D - 119 232 IPR012340 -
Trre4g03347 233 SUPERFAMILY Nucleic acid-binding proteins 126 227 IPR012340 -
Trre4g03347 233 CDD RPA1_DBD_A_like 27 113 - -
Trre4g03347 233 SUPERFAMILY Nucleic acid-binding proteins 10 117 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre4g03347 Trre-Chr4 39889339 39890217 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre4g03347 3 192 Core DNA Replication Machinery Family AT2G06510 22.222 3.77e-08 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre4g03347 - - tpra:123915358 283.108