Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre4g03346 ATGTGTATGACCATCGAAAATGAGCACCAGTTTTCATCATTTGCTGAAATTAATTCAACTAGGTCAAGTTGGAATTGTAGGGCAAAGATCATCCGACTTTGGCAAACTTCTAATTTCAATCGAAACACATTGCCTTTTTCTATTGAAATGGTTTTAATGGATTCTTATGGTGGTAGAATTCATGCTACAGTTAAAACAACTTTTATCTATAAATTTAAGGATGAACTAATAGAGGGAAAAGTTTATACTTTTGAAAAGATGGGGGTCTCACCTAATGTTGGAGCTTATCGTACTACTCATCACAATTTTAAGTTAAATTTCAAAGCCACTACATTGGTTCAAAGGCTTTTTAATCAAGACATTGTTAGATCTCCATATAACTTTGTTCCAATTGGACAGATTGTTGGAGGCTCTTATGACACTGATTTCTTAGTTGATGTTATTGGAATATTGATTGATGTTGGTCGTGAGCGTGAAATTAATGATCAAGATGGAGCGCCCACAAAAGTCAATGTCATTGAAATAGAGGAAGATGGGAGTAAGATTCAATGTTATTTGTATGGGGCATATGTTGATGTACTTAATGCTTTTCTTGGAGCTGGACATGTCCAAAATGTTGCTGTCGTTATGATGTTTGCCAAGGCCGTAGCTTTTCAAGTTATTTACATGAACTTTGTATGCAAGATTCATATTCAAAACTGTCTCAACTCTACCTATTTGTCCTTTAACCCTTTCTAA 738 0.3469 MCMTIENEHQFSSFAEINSTRSSWNCRAKIIRLWQTSNFNRNTLPFSIEMVLMDSYGGRIHATVKTTFIYKFKDELIEGKVYTFEKMGVSPNVGAYRTTHHNFKLNFKATTLVQRLFNQDIVRSPYNFVPIGQIVGGSYDTDFLVDVIGILIDVGREREINDQDGAPTKVNVIEIEEDGSKIQCYLYGAYVDVLNAFLGAGHVQNVAVVMMFAKAVAFQVIYMNFVCKIHIQNCLNSTYLSFNPF 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre4g03346 245 SUPERFAMILY Nucleic acid-binding proteins 126 214 IPR012340 -
Trre4g03346 245 SUPERFAMILY Nucleic acid-binding proteins 10 117 IPR012340 -
Trre4g03346 245 Gene3D - 119 244 IPR012340 -
Trre4g03346 245 Gene3D - 9 115 IPR012340 -
Trre4g03346 245 CDD RPA1_DBD_A_like 27 113 - -
Trre4g03346 245 Pfam Domain of unknown function DUF223 49 144 IPR003871 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre4g03346 Trre-Chr4 39889239 39890217 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre4g03346 3 190 Core DNA Replication Machinery Family AT2G06510 22.449 2.92e-08 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre4g03346 - - tpra:123886531 308.145