Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre4g03303 ATGGCTTTTTGGGGTGTTGAAATCAAACCTGGAAAGCCTTTTACTCACACATACGATGGTTCCAAAGGACGCCTTCACATTTCAATGGCCACTTTGGGACTTGGCACTGCAATTACGAAAAGCACACTGCAATGTAATGTGGGAAACAAAAGCCCTGTTTATCTTTGCTCTCTTTATCCTGGAAAAACTGAGTCGTTGCAATTGAATTTGGAGCTTGAGGAAGATGGTAATGTTATTTTCTCTGTCATTGGCCCTCGGAGTATTCATCTCTGCGGTTATTATCTTGCTCATGGCCGCTATACCAATACTCTTGATGAATCGGAATCATATGGAGAAGATATAGCTGATACAGAAACAGAGAAATCTGTTCACAGTGATGAAGATGACTATGATGATAGTTTTATTGATGATGACAGTGATCCAGCAGTTTTCTCACCATCTCCTATTTCCAATGAAGAGGATGCATCTTATGATAGCGGACGGAAAAGTGCGAAAGGCAGCCGAAGAAGGCTGAGGAAGAAGTACCAGTTGGTAGAGTCGGATGATGATATCAGTCTTGAAGAAAAGAAAATTGTAAATGACAATGTGCATGTACAATCTCAGGAAGTTGATAATGAAGATAGTCTACCAATTTCATCGATCTGCAAGAATAAAGCCTCTGGAAGGATCTTGGATCAGGAAATGGATGATATTGTTGACAAAGAAGCGGTCGATGCTGGCAAAAAAGACAATGAAGACCCTGAGAATAGTACTATTGAAACAAAATTGAAAACTGACAATGTTGTTACAGATAATCAGACTCATAGGGAAGCTGAACCTTCAGACCACTTGGCAGTTCCTTGCACTGTTCTGAATGTTGGGGATATTAAAAAGTCAAAAAAGAAAAAGAAGGGAAAGGAAAAAGAAACCAAGAGTTCTTGTACTGACCGTTCCACCGAACTAGATAATGCTGCGCAAGATGAGCAAAAAATGAACACGGCCCAGGATCTCTTGGATCAGGAAATGGCCGATAATGTTGACAAAGAAGCAGTTGATGTTGGAAAAGAAGACGGTGAAGACCCTGAGAGTAGTACTATTGAAACAAAATTGAAAACTGACAATGTTGTTGCAGTTATTCAGACTCACAGGGAAGCTGAACCTTCAGATCCCTTAGCAGTTCCTTGCACTCTTCCGGATGTTGGGGATATTAAAAAGTCAAAAAAGAAAATGAAGGGAAAGGAGAAAGAAACCAAGAGTTCTTGTAATGGTCATTCCACCGAACTAGATAATTCTGCGCAAGATGAGCAAAAAATGAACACGGCCCAGGATCTTTTGGGTCAGGAAATGGCTGATAATGTTGACAAAGAAGCAGTTGATGCTGGCAATAATGAACAGCACCAGCAGCAAGCTGATGATAAGAAAGCTGAAACCGCGGATAAAATACTTCCTTCTTCACAGGTTGCTCAACGACAGGATGAAAAACCAAAGAGAAAAAGGAAAGAACGGTCAAAGGAGGAGACAATTTTTACTACTGATGATGCTTGTATTAGCAATGCTGTTAACCTGCCACAGGGAAATGAAGGCAATTATCAGGACATTGTTAATAGGGATGATAAGATTTCAGATAGTGTTGCACTACCTTCCACTGAAACGGATTCTCCAAAGAAAACAAAGAGGAGAAAAAAAGAACATAAAAACAAATCTTCACTTCCTGAAGGTGGCAATGGAAATGCCGAAGGTATCACTCAAGATGAGGAAGCCAACAAAGAGACAGCAGAGTCTGATAGTCTGATTCATAAACTTTCTGAAACGAAAGAGCAACATCAGAAGCTAACAATTGAAAATGTGGACAATGGGGCTCAAGACAAGAAGGTTAAGAAAAAGAAGAAAAGTAAAAGTCAGGGCAGTGAAGTTGTAAATTCTGCTTTGCCTGTATCGGTTGAGCCAAGTACTGAGATGATGAAGGAGGATGGAAATAATACGGAGGATACAAAGTCTTCCCAAGTTAGAACATTGTCAAATGGACTAGTTATTGAAGAGCTAGAGACGGGGAAAGAAAATGGGAAAATTGCTGCATTAGGGAAAAAGATCAGCATCAATTACACTGGCAAGTTGAAGGAAAATGGTGCGGAGGTTGAGTCAAATGCTGGCCAAGCCTCTTTCAAATTTCGCCTTGGTAAAGGAGAAGTTATTGAGGGTTTGGATATTGGCCTTGAAGGCATGCGAGTTGGAGAAAAGAGAAGACTCATAATTCCACCATCAATGACGTCTAAGAAGAATGGTGACAGTGAAAATATACCGCCGAATTCATGGTTGATATATGAATTGGAACTTGTTAAAGTTCATTGA 2328 0.4021 MAFWGVEIKPGKPFTHTYDGSKGRLHISMATLGLGTAITKSTLQCNVGNKSPVYLCSLYPGKTESLQLNLELEEDGNVIFSVIGPRSIHLCGYYLAHGRYTNTLDESESYGEDIADTETEKSVHSDEDDYDDSFIDDDSDPAVFSPSPISNEEDASYDSGRKSAKGSRRRLRKKYQLVESDDDISLEEKKIVNDNVHVQSQEVDNEDSLPISSICKNKASGRILDQEMDDIVDKEAVDAGKKDNEDPENSTIETKLKTDNVVTDNQTHREAEPSDHLAVPCTVLNVGDIKKSKKKKKGKEKETKSSCTDRSTELDNAAQDEQKMNTAQDLLDQEMADNVDKEAVDVGKEDGEDPESSTIETKLKTDNVVAVIQTHREAEPSDPLAVPCTLPDVGDIKKSKKKMKGKEKETKSSCNGHSTELDNSAQDEQKMNTAQDLLGQEMADNVDKEAVDAGNNEQHQQQADDKKAETADKILPSSQVAQRQDEKPKRKRKERSKEETIFTTDDACISNAVNLPQGNEGNYQDIVNRDDKISDSVALPSTETDSPKKTKRRKKEHKNKSSLPEGGNGNAEGITQDEEANKETAESDSLIHKLSETKEQHQKLTIENVDNGAQDKKVKKKKKSKSQGSEVVNSALPVSVEPSTEMMKEDGNNTEDTKSSQVRTLSNGLVIEELETGKENGKIAALGKKISINYTGKLKENGAEVESNAGQASFKFRLGKGEVIEGLDIGLEGMRVGEKRRLIIPPSMTSKKNGDSENIPPNSWLIYELELVKVH 775
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre4g03303 775 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 687 775 IPR001179 GO:0003755
Trre4g03303 775 Pfam Nucleoplasmin-like domain 3 95 IPR041232 -
Trre4g03303 775 MobiDBLite consensus disorder prediction 114 128 - -
Trre4g03303 775 MobiDBLite consensus disorder prediction 109 172 - -
Trre4g03303 775 MobiDBLite consensus disorder prediction 226 277 - -
Trre4g03303 775 SUPERFAMILY FKBP-like 645 774 - -
Trre4g03303 775 MobiDBLite consensus disorder prediction 576 617 - -
Trre4g03303 775 PANTHER FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKPA 41 774 - -
Trre4g03303 775 MobiDBLite consensus disorder prediction 483 502 - -
Trre4g03303 775 MobiDBLite consensus disorder prediction 377 660 - -
Trre4g03303 775 MobiDBLite consensus disorder prediction 226 253 - -
Trre4g03303 775 MobiDBLite consensus disorder prediction 503 524 - -
Trre4g03303 775 MobiDBLite consensus disorder prediction 442 472 - -
Trre4g03303 775 Gene3D - 638 775 IPR046357 GO:0003755
Trre4g03303 775 MobiDBLite consensus disorder prediction 416 439 - -
Trre4g03303 775 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 684 772 IPR001179 GO:0003755
Trre4g03303 775 MobiDBLite consensus disorder prediction 301 317 - -
Trre4g03303 775 MobiDBLite consensus disorder prediction 290 362 - -
Trre4g03303 775 MobiDBLite consensus disorder prediction 318 332 - -
Trre4g03303 775 MobiDBLite consensus disorder prediction 394 415 - -
Trre4g03303 775 Gene3D Nucleoplasmin core domain 1 99 - -
Trre4g03303 775 MobiDBLite consensus disorder prediction 334 360 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre4g03303 Trre-Chr4 39181957 39189691 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre4g03303 687 772 Calmodulin-binding Proteins AT5G48570 36.782 9.85e-12 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre4g03303 K14826 - jre:109006154 427.557