Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre4g03263 ATGGCCGCGTCTGCTTCTACCACCTCTTCTCATTTCCTTCGCCCTCTTTCTCCAATCAAATTCCCTAAATGCCCTCACCTTTTATCATATTCACACTTTCGCCCTCGCCTACTCACTTCCCAAACCCAATCAACCACCATTCGTGCTACCTCCGCTGTTGTTGTGGACTCGGATTTAAGTACAAAGCAGGATCAGGGAACACAAGTTGATTTATTTGCATGTCCGATATGTTATGAACCATTGATAAGAAAAGGTCCTGTTGGCCTGAACTTATCAGCAATCTACAGGTCTGGTTTCAAGTGTAAGAGATGTCAAAAATCATACACTAGCAAAGACGGGTATTTGGACCTGACAGTGACTTATGGGTTGAGAGATTATATTGAAATTCAACCTGTTAGGACTGAACTTTTTAGGAGTCCCCTTGTTTCATTCTTATATGAAAGAGGTTGGCGCCAGAATTTTAGGCAAAGTGGCTTTCCTGGTCTGGATGAAGAGTTCAAAATGGCTCAAGAGTACTTTGAACCAGCTAAAGGTGGTCTGGTTGTCGATGTTAGCTGTGGAAGTGGTTTGTTTTCCCGAAAATTTGCAAAATCTGGAACCTATTCTGGAGTCATTGCACTAGATTTTTCAGAAAATATGCTTCGTCAATGCTACAATTTCATTAAGAAAGATGACACACTTTCAACCACTAATATTGCCCTTGTAAGGGCAGATGTTTCTAGGCTTCCCTTTGCGTCAGGTTCAGTTGATGCTGTTCATGCTGGTGCCGCATTGCATTGCTGGCCATCTCCCTCCAACGCTGTTGCTGAAATCACCCGTGTACTAAGAAGCGGTGGAGTATTTGTCGGAACCACTTTTCTTCGTTATACTTCATCAACTCCCTGGATTGTACGACCCTTCAGAGAGAGAAATTCTCAAGGCTATGGATTTTTAACGGAGGAAGAAATTAAAGACCTTTGCACCTCATGTGGTCTTACAAATTACTCATGCAAAATTGATAAGTCTTTTATTATATTTACGGTTCAGAAGCCATAA 1035 0.4193 MAASASTTSSHFLRPLSPIKFPKCPHLLSYSHFRPRLLTSQTQSTTIRATSAVVVDSDLSTKQDQGTQVDLFACPICYEPLIRKGPVGLNLSAIYRSGFKCKRCQKSYTSKDGYLDLTVTYGLRDYIEIQPVRTELFRSPLVSFLYERGWRQNFRQSGFPGLDEEFKMAQEYFEPAKGGLVVDVSCGSGLFSRKFAKSGTYSGVIALDFSENMLRQCYNFIKKDDTLSTTNIALVRADVSRLPFASGSVDAVHAGAALHCWPSPSNAVAEITRVLRSGGVFVGTTFLRYTSSTPWIVRPFRERNSQGYGFLTEEEIKDLCTSCGLTNYSCKIDKSFIIFTVQKP 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre4g03263 344 Pfam Methyltransferase domain 182 282 IPR013216 GO:0008168
Trre4g03263 344 Gene3D Vaccinia Virus protein VP39 137 340 IPR029063 -
Trre4g03263 344 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 145 336 IPR029063 -
Trre4g03263 344 CDD AdoMet_MTases 181 287 - -
Trre4g03263 344 PANTHER METHYLTRANSFERASE 76 329 - -
Trre4g03263 344 FunFam Putative methyltransferase, chloroplastic 137 343 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre4g03263 Trre-Chr4 38341845 38351315 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Trre4g03263 Methyltransf_11 8.7e-21 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre4g03263 - - gmx:100812067 559.681