Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre4g03262 ATGTTAACTCTAAAAGGAGGGAGCAGACCACCATGGGTAGGTTTAGGAGCAGCAGTTTGGGTTCAAATAGCTTCAGGAAACACCTTTACTTTTCCGTTGTACTCACACTCTTTGAAATCTGTCTTAGGTTTTAATCAAAGACAAGTTACACTACTTGGTGTTGCTAATGATATTGGTGAAAACGTTGGTTTGTTACCTGGTATTGCTTGTAATACCTTCCCACCTTGGCTCATACTTTCTGTCGGTGCTTTTGCTTCTTTCATTGGTTATGGTCTTCTTTGGCTTTCTGTTACACAAACACTCACTAATCTTCCTTACTTGTTGCTTTGGTTTGCCCTTGTTATTGCTTCCAACAGTAGTGCATGGTTAACCACTGCCGTTCTCGTAACCAACATGCGAAATTTCCCTGTAAGTCGAGGCAAAGTTGCGGGAATCCTTAAAGGTTATGGAGGGCTTAGTGCTGCTGTTTTCACCGAAATTTACAGCTTACTGCTTCATAATTCTTCTTCTAAGTTCCTCTTGTTGCTTGCTATTGGTATTCCAGTTGTTTGTTTCAGCATGATGTTTCTTGTTAGGCCTTGTACACCAGCATTGGATGAGGACTCGACATCTAACTCTCATTTTATATTTATCCAGTGTTCTAGTGTTGTCTTGGGTGTATATCTTCTCGCAACTACAATATTCGGCAATCTTCTTCCATTAAGTGGTACAGTTTCCTATATTTTGATTGCTGTCATGATTGTTCTTCTCATGGCTCCAATTGCTGTCCCTATAAAGATGACATTGTATCGTAAGTCAATTTCAAATTCTGAGGAACGAGTTGGATCTTCTGACTCTCTCAGTCAAGGCAACAATGACAAAATAGAGCCACTGCTAGGATCTTCATCGGCAGGAGCACTTGGAAGCTCGAACGATCAGGATGATTCATCTGAAGTAGCTATGCTTCTTGCGTTAGGTGAGGGAGCGATAAAGCAGAAGAAGAGGAAACCTAAACGCGGGGAAGATTTTAAGTTTACTGAGGCCATAGTTAAGGCTGATTTCTGGCTACTGTTTATTGTTTATTTTGTTGGCGTTGGCACTGGAGTTACTGTTCTCAATAATCTAGCCCAAATAGGTATTGCTCAAGGTGAAGAAGATACTACAACCTTACTGTCAATTTTCAGTTTTTGCAATTTTGTTGGTCGGCTCGGTGGAGGAGTTGTTTCGGAGCATTTTGTCAGGACGAAATTAATCCCAAGGACATTCTGGTTGACATGCACACAGACAGTCATGCTATTGGTATACCTTCTGTTTGCCTTTGCTATCAACGGAACCCTTTATCCTGCAGTTGCATTTCTCGGTGTTTGCTATGGCGTACAAGTTTCCATAATGATCCCGACTGTTTCCGAGCTTTTTGGTCTGAAGAACTTTGGTGTATTAAGCAATGTGATGTCGTTGGGAAATCCACTTGGAGCAACCCTTTTCTCAGCATTGCTTGCAGGTTCTATATATGATACTGAGGCAGCAAAGCAGCATGGTATTAACCTCGTTGCATCTGGTGCTTCCTGCATCGGCGCAAATTGCTTTAAGCTGACATTTTTCATTCTTTCTGGTGTTTGTGGTGCTGGAATCATGTTGAGCATTATTCTCACTTTGAGAATTAAGCCTGTTTACCAAATGCTTTATGCTGGAGGCTCTTTCAGAGTTCCTCAAACAACTCCGAGTCGGTAA 1710 0.4158 MLTLKGGSRPPWVGLGAAVWVQIASGNTFTFPLYSHSLKSVLGFNQRQVTLLGVANDIGENVGLLPGIACNTFPPWLILSVGAFASFIGYGLLWLSVTQTLTNLPYLLLWFALVIASNSSAWLTTAVLVTNMRNFPVSRGKVAGILKGYGGLSAAVFTEIYSLLLHNSSSKFLLLLAIGIPVVCFSMMFLVRPCTPALDEDSTSNSHFIFIQCSSVVLGVYLLATTIFGNLLPLSGTVSYILIAVMIVLLMAPIAVPIKMTLYRKSISNSEERVGSSDSLSQGNNDKIEPLLGSSSAGALGSSNDQDDSSEVAMLLALGEGAIKQKKRKPKRGEDFKFTEAIVKADFWLLFIVYFVGVGTGVTVLNNLAQIGIAQGEEDTTTLLSIFSFCNFVGRLGGGVVSEHFVRTKLIPRTFWLTCTQTVMLLVYLLFAFAINGTLYPAVAFLGVCYGVQVSIMIPTVSELFGLKNFGVLSNVMSLGNPLGATLFSALLAGSIYDTEAAKQHGINLVASGASCIGANCFKLTFFILSGVCGAGIMLSIILTLRIKPVYQMLYAGGSFRVPQTTPSR 569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre4g03262 569 Gene3D MFS general substrate transporter like domains 342 553 IPR036259 -
Trre4g03262 569 SUPERFAMILY MFS general substrate transporter 11 198 IPR036259 -
Trre4g03262 569 CDD MFS_Mch1p_like 10 537 - -
Trre4g03262 569 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 12 552 - -
Trre4g03262 569 SUPERFAMILY MFS general substrate transporter 221 549 IPR036259 -
Trre4g03262 569 Pfam Nodulin-like 11 258 IPR010658 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre4g03262 Trre-Chr4 38335556 38338943 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre4g03262 2 566 Nodulin-like Gene Family AT1G80530 55.556 0.0 637
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre4g03262 - - gmx:100794012 907.901