Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre4g03119 ATGGGAGACAGTGACGTTGAAGGCGGTGCTGCTGGAGATGACGGTTTTCATTCTCCGATCGGCCGTAAATATCGTCCGGTCTTGGCTAACGATCGTGCTGTTCTTGAGATGTCTTCGATAGATCCAGGATCTTCTTCCGCTTCTTCTTCTGTTTTTCCAGACCAACCTCCTAATCTCAGAAAAATAAATGTAAGTAAGAGTGGGAATGGGAGTTCAGATGCTAAAGATGGGAATTCTCTTCATCAACCTCAACCTAATGGACCCCAGCAGGAATCTAAACTGGAACTCTTTGGTTTTGATTCTCTTGTCAACATTCTTGGTCTCAAAAGCATGACTGGTGAGCAAATCGCACCGCCGTCTAGTCCTAGAGATGGTGAGGATATTACAATTACTGCTGGGCTGCCAAAGCCTGATGCTCCCAAACTAGGTACAATGATGGGTGTTTTCATTCCGTGTGTTCAAAGCATTTTGGGCATCATCTACTACATTCGTTTCTCTTGGATTGTTGGTATGGCTGGCATAGGAGAGACATTGGTTCTTGTTGCTATGTGTGGTACTTGTACGTTCCTCACTTCAATATCACTGAGTGCTATTGCAACCAATGGTGCCATGAAGGGTGGCGGACCATACTATCTAATAGGTCGCGCGCTTGGTCCCGAAGTTGGAGTTAGTATTGGTTTATGCTTCTTCCTTGGAAATGCAGTTGCTGGAGCTCTGTATGTATTGGGAGCTGTAGAAACATTTTTGAAAGCAGTTCCTTCTGCTGGGATTTTTAGAGAGACTATTACACAAGTTAATGGTACTGCAATTGCACAACCGATAGAGAGTCCAAGTTCACACGACCTTCAAATTTATGGGATTGTTGTGACTATTGTGTTATGCTTTATTGTATTTGGAGGAGTGAAGATGATAAATCGGGTTGCACCTGCATTTCTCATACCTGTTTTATTCTCACTCATCTGCATATATTTGGGAATTCTGTTGGCAAAGGAGGATCATCCCACAGAGGGAGTTACTGGGTTGAGTATGAAGACTATTAAAGAAAATTGGAGTTCAGATTACCAAAAGACTAACGATGCTGGAATTCCAGAACCTGATGGTTCTGTAACCTGGGATTTCAATTCTTTGGTGGGCCTCTTTTTCCCAGCGGTGACAGGAATAATGGCAGGTTCTAACCGATCATCTTCTCTGCGAGATACTCAACGATCTATTCCTGTTGGAACTTTATCTGCAACTCTTGTAACTTCTTGTATGTATCTTATTTCTGTGATAATGTTTGGCGCCATTGCCACCAGAGAGAAGCTTTTAACTGACAGGTTGCTTACAGCTACAGTTGCCTGGCCTTTTCCTTCATTAATTAAAATTGGGATTATTCTTTCAACCATGGGTGCTGCTCTTCAGAGCCTGACTGGTGCCCCGCGTCTGCTTGCAGCTATAGCCAATGATGATATTTTACCTATTCTGAACTACTTTAAAGTTGCAGATGGCAGTGAGCCACATGTTGCTACCCTTTTTACTGCTTTCCTATGTATTGGGTGTGTCATCATTGGGAATCTTGATCTTATCACTCCAACTGTGACCATGTTTTTCCTTCTGTGTTATTCTGGTGTCAACTTATCTTGCTTCCTTCTCGATCTACTAGATGCTCCTAGTTGGCGTCCTCGGTGGAAATTTCATCATTGGAGTTTGTCGCTTCTAGGAGCATTACTTTGCGTAGTGATCATGTTCCTAATCTCTTGGTCATTCACCGTGGTTTCTTTGGCCCTTGCAAGCCTTATATACAAGTACGTGAGCATCAAAGGAAAGGCTGGGGACTGGGGAGATGGTTTTAAAAGTGCTTATTTCCAACTTGCACTTCGTAGCCTTCGGTCGCTAGGAGCAAATCAAGTGCACCCAAAGAATTGGTATCCAATTCCGCTTGTATTTTGTCGACCCTGGGGCAAACTGCCAGAAAATGTTCCCTGCCATCCGAAACTTGCAGACTTTGCTAACTGTATGAAGAAGAAAGGTCGTGGAATGACCATATTTGTCTCTATACTAGACGGGGATTACCATGAATGTGCTGAAGAGGCCAAGGCAGCTTGTAAGCAACTTAGTACCTATATTGAGTACAAGAATTGTGAAGGTGTGGCCGAGATTGTTGTAGCTCCTAACATGTCTGATGGTTTTCGTGGCATCGTTCAGACAATGGGCCTTGGTAATCTTAAGCCGAACATTGTGGTGATGCGTTATCCAGAAATCTGGCGCCGGGAGAACTTAACTGATATCCCCGCCACCTTTGTTGGTATAATTAATGACTGCATTGTTGCAAACAAGGCAGTAGTTATAGTGAAAGGTCTGGATGAATGGCCAAATGTGTACCAGAAGCAGTACGGTACAATTGATTTGTATTGGATTGTAAGAGATGGCGGTCTCATGCTACTTCTCTCTCAATTGCTTCTTACCAAAGAGAGCTTTGAGAGTTGTAAGATTCAGGTTTTCTGTATTGCAGAAGACGATGCAGATGCAGAGGGGCTAAAAGCTGATGTTAAAAAATTCCTTTACGATCTTCGGATGCAGGCAGAAGTCTTTGTCATAACAATGAAATGGGAAGAACAAGTGGATAGCGGGTCTCCGCAAGATGAGTCATTAGACGCATTTACTAGTGCCAATCAACGAATTGTTGATTATTTAACCCAAATGAAGGCAACAGCAGAGAGAGAAGGTGCCCCTCTTATGGCAGATGGTAAGACCGTGGTTGTGAACGAGAAGCAAGTAGAAAAGTTTTTATACACAACTCTTAAGCTGAATTCCATAATTTTGAGATACTCGAGAATGGCTGCTGTTGTTTTAGTAAGTCTTCCTCCCCCTCCATTGTGCCATCCAGCATATTTCTATATGGAGTATATGGATCTGTTGCTGGAGAATGTACCAAGGATTTTGATTGTAAGAGGATATCGTAGAGATGTTGTAACTCTATTCACATAG 2967 0.4294 MGDSDVEGGAAGDDGFHSPIGRKYRPVLANDRAVLEMSSIDPGSSSASSSVFPDQPPNLRKINVSKSGNGSSDAKDGNSLHQPQPNGPQQESKLELFGFDSLVNILGLKSMTGEQIAPPSSPRDGEDITITAGLPKPDAPKLGTMMGVFIPCVQSILGIIYYIRFSWIVGMAGIGETLVLVAMCGTCTFLTSISLSAIATNGAMKGGGPYYLIGRALGPEVGVSIGLCFFLGNAVAGALYVLGAVETFLKAVPSAGIFRETITQVNGTAIAQPIESPSSHDLQIYGIVVTIVLCFIVFGGVKMINRVAPAFLIPVLFSLICIYLGILLAKEDHPTEGVTGLSMKTIKENWSSDYQKTNDAGIPEPDGSVTWDFNSLVGLFFPAVTGIMAGSNRSSSLRDTQRSIPVGTLSATLVTSCMYLISVIMFGAIATREKLLTDRLLTATVAWPFPSLIKIGIILSTMGAALQSLTGAPRLLAAIANDDILPILNYFKVADGSEPHVATLFTAFLCIGCVIIGNLDLITPTVTMFFLLCYSGVNLSCFLLDLLDAPSWRPRWKFHHWSLSLLGALLCVVIMFLISWSFTVVSLALASLIYKYVSIKGKAGDWGDGFKSAYFQLALRSLRSLGANQVHPKNWYPIPLVFCRPWGKLPENVPCHPKLADFANCMKKKGRGMTIFVSILDGDYHECAEEAKAACKQLSTYIEYKNCEGVAEIVVAPNMSDGFRGIVQTMGLGNLKPNIVVMRYPEIWRRENLTDIPATFVGIINDCIVANKAVVIVKGLDEWPNVYQKQYGTIDLYWIVRDGGLMLLLSQLLLTKESFESCKIQVFCIAEDDADAEGLKADVKKFLYDLRMQAEVFVITMKWEEQVDSGSPQDESLDAFTSANQRIVDYLTQMKATAEREGAPLMADGKTVVVNEKQVEKFLYTTLKLNSIILRYSRMAAVVLVSLPPPPLCHPAYFYMEYMDLLLENVPRILIVRGYRRDVVTLFT 988
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre4g03119 988 FunFam Cation-chloride cotransporter 1 141 605 - -
Trre4g03119 988 Pfam Solute carrier family 12 789 987 IPR018491 GO:0006811|GO:0016020|GO:0022857
Trre4g03119 988 Pfam Solute carrier family 12 657 778 IPR018491 GO:0006811|GO:0016020|GO:0022857
Trre4g03119 988 Pfam Amino acid permease 147 623 IPR004841 GO:0016020|GO:0055085
Trre4g03119 988 Gene3D Amino acid/polyamine transporter I 140 605 - -
Trre4g03119 988 PANTHER SOLUTE CARRIER FAMILY 12, CATION COTRANSPORTERS 123 985 IPR004842 GO:0006811|GO:0015377|GO:0016020
Trre4g03119 988 MobiDBLite consensus disorder prediction 39 91 - -
Trre4g03119 988 MobiDBLite consensus disorder prediction 1 25 - -
Trre4g03119 988 NCBIfam K-Cl cotransporter 81 988 IPR004842 GO:0006811|GO:0015377|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre4g03119 Trre-Chr4 35046262 35057180 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre4g03119 142 988 Inorganic Solute Cotransporters AT1G30450 83.019 0.0 1456
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre4g03119 K14427 - gmx:100795205 1722.98