Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre4g02713 ATGGCTTTTTGGGGTGTTGAAATCAAACCTGGAAAGCCTTTTACTCACACATACGATGGTTCTAAAGGACGCCTTCACATTTCAATGGCCACTTTGGGACTTGGCACTGCAATTACGAAAAGCACACTGCAATGTAATGTGGGAAACAAAAGCCCTGTTTATCTTTGCTCTCTTTATCCTGGAAAAACTGAGTCGTTGCAATTGAATTTGGAGCTAGAGGAAGATGGTAATGTTATTTTCTCTGTCATTGGCCCTCGGAGTATTCATCTCTGCGGTTATTATCTTGCTCATGGCCGCTATACCAATACTCTTGATGAATCGGAATCATATGGAGAAGATATAGCTGATACAGAAACAGAGAAATCTGTTCACAGTGATGAAGATGACTATGATGATAGTTTTATTGATGATGACGGTGATCCAGCAGTTTTCTCACCATCTCCTATTTCCAATGAAGAGGATGCATCTTATGATAGCGGACGGAAAAGTGCGAAAGGCAGACGAAGAAGGCTGAGGAAGAAGTACCAGTTGGTAGAGTCGGATGATGATATCAGTCTTGAAGAAAAGCAAATTGTAAATGACAATATGCATGTACAATCTCAGGAAATTGATAATGAAGATAGTCTACCAATTTCATCGATCTGCAAGAATAAAGCCTCTGGAAGGATCTTGGATCAGGAAATGGATGATATTGTTGACAAAGAAGCGGTCGATGCTGGCAAAAAAGACAAAGAAGACCCTGAGAATAATACTATTGAAACAAAATTGAAAACTGACAATGTTGTTACAGATAATCAGACTCATAGGGAAGCTGAATCTTCAGACCACTTGGCAGTTCCTTGCACTGTTCTGGATGTTGGGGATATTAAAAAGTCAAAGAAAAAGAAGGGAAAGGAAAAAGAAACCAAGAGTTCTTGCACTGACCGTTCCACCGAACTAGATAATGCTGCGCAAGATGAGCAAAAAATGAACACGGCCCAGGATCTCTTGGATCAGGAAATGGCCGATAATGTTGACAAAGAAGCAGTTGATGTTGGAAAAGAAGACGGTGAAGACCCTGAGAGTAGTACTATTGAAACAAAATTGAAAACTGACAATGTTGTTGCAGATATTCAGACTCACAGGGAAGCTGAACCTTCAGATCCCTTAGCAGTTCCTTGCACTCTTCCGGATGTTGGGGATATTAAAAAGTCAAAAAAGAAAAAGAAGGGAAACGAGAAAGAAACCAAGAGTTCTTGTAATGGTCATTCCACCGAACTAGATAATTCTGCGCAAGATGAGCAAAAAATGAACACGGCCCAGGATCTCTTGGGTCAGGAAACTGATAATGTTGACAAAGAAGCAGTTGATGCTGGCAATAATGAACAGCACCAGCAGCAAGCTGATGATAAGAAAGCTGAAACCGCGGATAAAATACTTCCTTCTTCACAGGTTGGTCAAGGACAGGATAAAAAACCAAAGAGAAAAAGGAAAGAACGGTCAAAGGAGGAGACAATTTTTACTACTGATGGTGCTTGTATTAGCAATGCTGTTAACCTGCCACAGGGAAATGAAGGCAATTATCAGGACATTGTTAATAGGGATGTTAAGATTTCAGATAGTGTTGCACTACCTTCCACTGAAACGGATTCTCCAAAGAAAACAAAGAGGAGAAAAAAAGAACATAAAAACAAATCTTCACTTCCTGAAGGTGGCAATGGAAATGCCGAAGGTATCACTCAAGATGAGGAAGCCAACAAAGAGACAGCAGAGTCTGATAGTCTGATTCATAAACTTTCTGAAACGAAAGAGCAACATCAGAAGCTAACAATTGAAAACAGTGTGGACAATGGGGCTCAAGACAAGAAGGTTAAGAAAAAGAAGAAAAGTAAAAGTCAGGGCAGTGAAGTTGTAAATTCTGCTTTGCCTGTATCGGTTGAGCCAAGTACTGAGATGATGAAGGAGGATGGAAATAATATGGAGGATACAAAGTCTTCCCAAGTTAGAACATTGTCAAATGGACTAGTTATTCAAGAGCTAGAAACGGGGAAAGAAAATGGGAAAATTGCTGCATTAGGGAAAAAGATCAGCATCAATTACACTGGCAAGTTGAAGGAAAATGGTGCGGAGGTTGAGTCAAATGCTGGCCAAGCCTCTTTCAAATTTCGCCTTGGTAAAGGAGAAGTTATTGAGGGTTTGGATATTGGCCTTGAAGGCATGCGAGTTGGAGAAAAGAGAAGACTCATAATTCCACCATCAATGACGTCTAAGAAGAATGGTGACAGTGAAAATATACCGCCGAATTCATGGTTGATATATGAATTGGAACTTGTTAAAGTTCATTGA 2325 0.4013 MAFWGVEIKPGKPFTHTYDGSKGRLHISMATLGLGTAITKSTLQCNVGNKSPVYLCSLYPGKTESLQLNLELEEDGNVIFSVIGPRSIHLCGYYLAHGRYTNTLDESESYGEDIADTETEKSVHSDEDDYDDSFIDDDGDPAVFSPSPISNEEDASYDSGRKSAKGRRRRLRKKYQLVESDDDISLEEKQIVNDNMHVQSQEIDNEDSLPISSICKNKASGRILDQEMDDIVDKEAVDAGKKDKEDPENNTIETKLKTDNVVTDNQTHREAESSDHLAVPCTVLDVGDIKKSKKKKGKEKETKSSCTDRSTELDNAAQDEQKMNTAQDLLDQEMADNVDKEAVDVGKEDGEDPESSTIETKLKTDNVVADIQTHREAEPSDPLAVPCTLPDVGDIKKSKKKKKGNEKETKSSCNGHSTELDNSAQDEQKMNTAQDLLGQETDNVDKEAVDAGNNEQHQQQADDKKAETADKILPSSQVGQGQDKKPKRKRKERSKEETIFTTDGACISNAVNLPQGNEGNYQDIVNRDVKISDSVALPSTETDSPKKTKRRKKEHKNKSSLPEGGNGNAEGITQDEEANKETAESDSLIHKLSETKEQHQKLTIENSVDNGAQDKKVKKKKKSKSQGSEVVNSALPVSVEPSTEMMKEDGNNMEDTKSSQVRTLSNGLVIQELETGKENGKIAALGKKISINYTGKLKENGAEVESNAGQASFKFRLGKGEVIEGLDIGLEGMRVGEKRRLIIPPSMTSKKNGDSENIPPNSWLIYELELVKVH 774
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre4g02713 774 Pfam Nucleoplasmin-like domain 3 95 IPR041232 -
Trre4g02713 774 SUPERFAMILY FKBP-like 645 773 - -
Trre4g02713 774 MobiDBLite consensus disorder prediction 287 316 - -
Trre4g02713 774 MobiDBLite consensus disorder prediction 114 128 - -
Trre4g02713 774 Gene3D Nucleoplasmin core domain 1 99 - -
Trre4g02713 774 MobiDBLite consensus disorder prediction 109 172 - -
Trre4g02713 774 MobiDBLite consensus disorder prediction 235 572 - -
Trre4g02713 774 MobiDBLite consensus disorder prediction 595 636 - -
Trre4g02713 774 MobiDBLite consensus disorder prediction 235 253 - -
Trre4g02713 774 MobiDBLite consensus disorder prediction 317 331 - -
Trre4g02713 774 MobiDBLite consensus disorder prediction 393 414 - -
Trre4g02713 774 PANTHER FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKPA 41 498 - -
Trre4g02713 774 MobiDBLite consensus disorder prediction 333 359 - -
Trre4g02713 774 Gene3D - 637 774 IPR046357 GO:0003755
Trre4g02713 774 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 683 771 IPR001179 GO:0003755
Trre4g02713 774 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 686 774 IPR001179 GO:0003755
Trre4g02713 774 MobiDBLite consensus disorder prediction 415 439 - -
Trre4g02713 774 MobiDBLite consensus disorder prediction 482 499 - -
Trre4g02713 774 MobiDBLite consensus disorder prediction 501 522 - -
Trre4g02713 774 MobiDBLite consensus disorder prediction 440 470 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre4g02713 Trre-Chr4 29381273 29388999 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre4g02713 686 771 Calmodulin-binding Proteins AT5G48570 36.782 1.01e-11 66.2