Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre4g02688 ATGAGGAAACATCATTTGACATATTTGGTGTTGTTTTTGTTGTTTTGTTTGAGGTTTTTTGTGCCTTGTTTGTGTCTAAAAGATGGTTTGGATAATGTTACTACTTCTGTTTATGTTGTTACTTTGAAACAAGCTCCTACTTCTCATTACTATGGTGGTGATTTGACAAGTTTGAATGATGATAATAATGGCTTCAAAGATAATGGAAGAACTCAATTTCAGAAACCAAGGTATGGTAATATTTCAAAGACAGATAAGAGATTTAGCTCTTATGTTACCCGAGTACACGATTCTTTGTTGAAGAAAGTGTTGAAAGGAGAGAAATATCTTAAGCTCTATAGCTACCATTACCTTATTAATGGATTTGCTGTGCTTGTTACCCAACAGCAGGCAGAGAGACTATCAAGGAGCAGTGAAGTGGCCAATGTGGTTTTGGATTTTTCCGTTAGAACTGCAACTACACATACTCCACAATTTTTGGGTCTGCCACAAGGAGCATGGTCTCAAAACGGCGGGTTTGAAACTGCTGGAGAAGGAATTGTTATCGGGTTTGTTGACACTGGCATAGATCCAACACACCCTAGTTTTGGCGATAGTAAATCTGATCATCTGTATCCTGTTCCTGCTCATTTTTCTGGTATCTGCGAGGTTACTCGTGATTTTCCATCTGGCTCTTGCAATAGGAAACTTGTTGGGGCACGTCATTTTGCAGCATCTGCTATAACCAGAGGAATATTTAATATGACTCAAGACTATGCTTCTCCCTTTGATGGTGATGGCCATGGCACGCATACCGCATCTGTGGCAGCAGGAAACCATGGGATTCCTGTGATTGTTGCTGGACATCACTTTGGGAATGCTAGTGGGATGGCTCCTCGATCACACATTGCCGTTTACAAGGCATTATACAAGAGCTTTGGAGGATTTGCTGCAGATGTTGTTGCCGCAATTGACCAGGCAGCTCAGGATGGTGTCGACATAATAAGTTTATCGATCACTCCAAATCGGCGCCCTCCTGGTGTTGCAACTTTCTTCAATCCTATCGACATGGCATTGCTGTCAGCTGTAAAGGCTGGTATTTTTGTAGTGCAAGCTGCTGGGAATACCGGACCGTCACCAATGAGCATGTCTTCTTTCAGTCCATGGATTCTTACTGTTGGTGCTGCCTCTCATGATCGGCTTTATAGTAACTCAATATCCCTTGGAAATAATGTGACCATACCTGGAGTTGGACTTGCACCTAGCACAGATGAAAACAAACTTTACAAACTAATTCATGCACACGATGCTTTGAACAATGACACATCGGTCTCTGATGACATGTATGTTGGTGAGTGCCAAGATGCAAGCAAGTACAATCGCGATTTGATCAAAGGGAATCTTCTGATCTGCAGCTACTCAATTCGATTTGTTCTTGGAATTTCCACTATCAAACGAGCTACCGAAACAGCCAAGAACGCTAGTGCAGCCGGTGTTGTCTTCTATATGGATCCTTATGTCATTGGTTTTCAGCTTAACCCGGTTGCAATAAAAATGCCTGGCATAATAATTCCATCTACAAATGACTCAAAGATTTTAATGCAATACTACAATTCTTCGTTGGAAATAGATGCGGTTTCGAAGAAAGTAGTTAACTTTGGGGCTGTTGCTGCAATATGTGGTGGACTAAAAGCAAATTACAGTAACACTGCACCAAAGGTTATGTATTACTCTGCCAGAGGACCAGATCCAGCGGATAGTCTTCCTCGTCAAGCAGACATTTTAAAACCCAATTTGTTAGCTCCTGGAAATTTTATATGGGCAGCATGGAGTTCTTTTGGCACCGACTCAGTTGAATTTCAAGGGGAGAATTTTGCAATGATGTCTGGCACAAGTATGGCTGCACCACATATTGCAGGTCTTGCTGCGCTAATTAAGCAAAAGTTCCCGAATTTTAGTCCTGCAGCCATTGCTTCTGCACTTTCGACTACTGCTTCTCAGAATGATAAGAGTGGCGGACCAATAATGGCTCAGCGATCATACGCCTTTCCAGATCTAAGCCAAACTCCGGCTACTCCTTTTGACATGGGAAGTGGTTTTGTGAATGCAACTGGAGCATTGAATCCGGGTTTAATCTTTGATTCCAGTTATGATGATTACATGTCATTTTTATGCGGTATCAACGGTTCAGCACCTGTGGTACTAAACTACACCGGTCAAAACTGTTTACTTTATAACTCCACTCTATATGGCCCTGATCTAAACTTGCCTTCAATCACTCTAGCAAAGCTAAACCAATCCACAATTGTGCAAAGAACAGTTCAAAACATTGCTGGAAATAATGAAACTTACAGTGTTGGTTGGAATGCTCCTTTCGGTGTTTCAGTGAAAGTAACTCCAACTCACTTTTCTATTGGCAACGGCGAAAAACAAGTCTTGTCCGTGATCTTGAATGCAACCGCGAATAATTCTGTTGCCAGCTTTGGAAAGATTGGTTTGTTTGGTGATCAAGGTCATATTGTTAACATTCCTCTTTCAGTTATATCTAAAATCTCATATAATAACATCACTACTAGTATCTAA 2562 0.4126 MRKHHLTYLVLFLLFCLRFFVPCLCLKDGLDNVTTSVYVVTLKQAPTSHYYGGDLTSLNDDNNGFKDNGRTQFQKPRYGNISKTDKRFSSYVTRVHDSLLKKVLKGEKYLKLYSYHYLINGFAVLVTQQQAERLSRSSEVANVVLDFSVRTATTHTPQFLGLPQGAWSQNGGFETAGEGIVIGFVDTGIDPTHPSFGDSKSDHLYPVPAHFSGICEVTRDFPSGSCNRKLVGARHFAASAITRGIFNMTQDYASPFDGDGHGTHTASVAAGNHGIPVIVAGHHFGNASGMAPRSHIAVYKALYKSFGGFAADVVAAIDQAAQDGVDIISLSITPNRRPPGVATFFNPIDMALLSAVKAGIFVVQAAGNTGPSPMSMSSFSPWILTVGAASHDRLYSNSISLGNNVTIPGVGLAPSTDENKLYKLIHAHDALNNDTSVSDDMYVGECQDASKYNRDLIKGNLLICSYSIRFVLGISTIKRATETAKNASAAGVVFYMDPYVIGFQLNPVAIKMPGIIIPSTNDSKILMQYYNSSLEIDAVSKKVVNFGAVAAICGGLKANYSNTAPKVMYYSARGPDPADSLPRQADILKPNLLAPGNFIWAAWSSFGTDSVEFQGENFAMMSGTSMAAPHIAGLAALIKQKFPNFSPAAIASALSTTASQNDKSGGPIMAQRSYAFPDLSQTPATPFDMGSGFVNATGALNPGLIFDSSYDDYMSFLCGINGSAPVVLNYTGQNCLLYNSTLYGPDLNLPSITLAKLNQSTIVQRTVQNIAGNNETYSVGWNAPFGVSVKVTPTHFSIGNGEKQVLSVILNATANNSVASFGKIGLFGDQGHIVNIPLSVISKISYNNITTSI 853
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre4g02688 853 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 182 193 IPR023827 -
Trre4g02688 853 Pfam Fibronectin type-III domain 746 840 IPR041469 -
Trre4g02688 853 Gene3D - 717 843 - -
Trre4g02688 853 Gene3D - 392 560 - -
Trre4g02688 853 CDD Peptidases_S8_3 152 659 IPR034197 -
Trre4g02688 853 PRINTS Subtilisin serine protease family (S8) signature 257 270 IPR015500 -
Trre4g02688 853 PRINTS Subtilisin serine protease family (S8) signature 177 196 IPR015500 -
Trre4g02688 853 PRINTS Subtilisin serine protease family (S8) signature 622 638 IPR015500 -
Trre4g02688 853 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 105 838 IPR045051 -
Trre4g02688 853 SUPERFAMILY Subtilisin-like 152 704 IPR036852 GO:0004252|GO:0006508
Trre4g02688 853 ProSitePatterns Serine proteases, subtilase family, serine active site. 623 633 IPR023828 -
Trre4g02688 853 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 28 150 IPR037045 -
Trre4g02688 853 ProSiteProfiles Serine proteases, subtilase domain profile. 157 700 - -
Trre4g02688 853 Pfam Peptidase inhibitor I9 37 152 IPR010259 -
Trre4g02688 853 CDD PA_subtilisin_like 398 533 - -
Trre4g02688 853 FunFam Subtilisin-like protease SBT1.5 179 402 - -
Trre4g02688 853 Pfam Subtilase family 177 663 IPR000209 GO:0006508|GO:0008236
Trre4g02688 853 Gene3D Peptidase S8/S53 domain 179 713 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre4g02688 Trre-Chr4 28591859 28598877 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre4g02688 1 845 Subtilisin-like Serine Gene Family AT4G20430 68.150 0.0 1179
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre4g02688 - - gmx:100820468 1409.05