Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre4g02683 ATGCATCCCACATCAAGTTTAAGCAAAGAAGATTCTGAAGGCAAAGTTGATCAGAAGCTATATAGAGCACACACTATTGAGCATGAGGAGTTTTTGGAAGTCATCAAATTGGACGGAGTTGCCCATTCACCTGAAGACACAATGATGGCCAGAGAATTGCTTCTGTTGCAACTCTGCAGCGGAATGGATGAGAATGCTATTGGCACCTGTGCAGAACTTATATTTGCTCCAATTGATGCTTCATTTGCTGATGATGCTCCACTTCTACCTTCTGGATTTCGCATCATTCCTCTTGAATCTGGAAAAGAAGCTTCCAGTCCTAATCGCACTCTTGACCTTGCATCTGCCCTTGACGTTGGTGGCCCTACTGGAAACCGAGCTTCAAGTGATAATGCTGGAAATTCTGGCTGTGTGAGATCTGTGATGACAATAGCATTTGAATTTGCCTTTGAAAGTCACATGCAAGAGAATGTAGCCTGCATGGCATGTCAATATGTTCGCAGTATTATATCATCAGTCCAAAGGGTAGCATTGGCACTTTCTCCTTCTCATATGAGTTCACATGCTGGGCTGAGGTCACCATTAGGTACTCCTGAAGCACAAACCCTTGCTCATTGGATCTGCAACAGTTACAGTGCTGAGGTGAGGCAGTTGGTGGGGCAATGTGTTTTACTACTGGATTTTTTTTTTTTTGAGAAAAAGTTTAATTTTTGTCCACCGGATGATGCATGGGCTAGAAAGAACTTTGAAAGACGAGGTGCAGCAATAATGAAAAATAACTTAAGCAAGGTTCGTCTCACAAGGAGAAGACCAAGTTGGATTTCTCAGAAACTGTGGAATACATTAGATAAGCATTGGAAAATTTCAAAATATAAAAAGAAGCGTATGCAGGCGAAAACAAATAGAGCATCTGACCGTGACAGTTTTGGAAAGCCCCTTCACACTTGTGGCTCTATTACCACATCACAACATAGAGCTAATTTGACGGAAACAAATGGCACTCCCCCCGATCCCGTAGATTTGTTTGTTTACACATACCAACATCGCAAGAATAATTTGGCTTGGGTTGATCGAAAATCGGAACATGTCTATGGAAAGTATAAACATAGATTGGAAGAATAA 1122 0.4162 MHPTSSLSKEDSEGKVDQKLYRAHTIEHEEFLEVIKLDGVAHSPEDTMMARELLLLQLCSGMDENAIGTCAELIFAPIDASFADDAPLLPSGFRIIPLESGKEASSPNRTLDLASALDVGGPTGNRASSDNAGNSGCVRSVMTIAFEFAFESHMQENVACMACQYVRSIISSVQRVALALSPSHMSSHAGLRSPLGTPEAQTLAHWICNSYSAEVRQLVGQCVLLLDFFFFEKKFNFCPPDDAWARKNFERRGAAIMKNNLSKVRLTRRRPSWISQKLWNTLDKHWKISKYKKKRMQAKTNRASDRDSFGKPLHTCGSITTSQHRANLTETNGTPPDPVDLFVYTYQHRKNNLAWVDRKSEHVYGKYKHRLEE 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre4g02683 373 Pfam Plant transposase (Ptta/En/Spm family) 276 373 IPR004252 -
Trre4g02683 373 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 18 215 IPR044830 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre4g02683 Trre-Chr4 28401900 28406623 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre4g02683 23 211 Homeobox Transcription Factor Family AT1G52150 79.365 5.01e-101 314
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre4g02683 K09338 - gmx:100800165 335.495