Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre4g02600 ATGGAGTATGATGGTGATCTATTTGCACTAGTCAAACCCTACATCACCTTTTCCACCACCACCACAATAGCCACCTCATCAACACATTTTTCCTCCGGTTTTGAAACTTTAGCATCTTCCAACTTCTCTCTTTACCCTGTAGAACAATCACGTCAAGACTCTCACAATGCTGTCTCTCCTACAACCTCAAATTCTAAAAAAAGGAAGAATAAGGTATGTGAAAAGAAAGCTAAAAATCTCACATCAGATTTATGGAAATGGAAAAAATATGGCCAAAAACCTATCAAAGGGTCACCATATCCAAGGGGATATTTTAAATGTAACAATTCAAAATGTTTAGCCAAAAAACAAGTTGACCAGATCAAATCAAATCCAACAATGTTCACAGTTACATATTTTGGTGAACATAATCACAAGCCATTGTCACCACAAATTGTCGCTATTGAAGACTCTTCTCAACTCTTTGAAAAACATATTCCTGAAAAGCAATATATTCCTCAACAACTTAATAATAATATTAATGAGGTGGTGAATTTCATTAATGTTGATGTGCCTCATGTTTCATCAACAAACCAAGTTGATGAACTCATTGTGTTGGAAGATTTTCTAATGGCTAAACCTGAGCAGGAATCGGATCCTCAAATTGATAAAGTACTTTTAGAGTTGGATAACCATATCGATGAACCTGAGGACCGTGTTACTAAACTCGATACGCCACATGTTTCGTCGACAAACCAACTTGGTGAAATTTTGGAGTTGAATAATCTAGTGGCCGAGGCCGCCAAGCTTAAGGAATGGGATACTGAAGTTGTAGATTTTGATGATAATGTCAATTGGGTTAGTCAACCTGACGTGTTTGTGAAGCAAGGGCTTTCTTTTTTGTCCAAGAATCAACAACATTGA 903 0.3677 MEYDGDLFALVKPYITFSTTTTIATSSTHFSSGFETLASSNFSLYPVEQSRQDSHNAVSPTTSNSKKRKNKVCEKKAKNLTSDLWKWKKYGQKPIKGSPYPRGYFKCNNSKCLAKKQVDQIKSNPTMFTVTYFGEHNHKPLSPQIVAIEDSSQLFEKHIPEKQYIPQQLNNNINEVVNFINVDVPHVSSTNQVDELIVLEDFLMAKPEQESDPQIDKVLLELDNHIDEPEDRVTKLDTPHVSSTNQLGEILELNNLVAEAAKLKEWDTEVVDFDDNVNWVSQPDVFVKQGLSFLSKNQQH 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre4g02600 300 Gene3D WRKY domain 66 141 IPR036576 GO:0003700|GO:0006355|GO:0043565
Trre4g02600 300 SMART WRKY_cls 81 140 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trre4g02600 300 MobiDBLite consensus disorder prediction 51 66 - -
Trre4g02600 300 SUPERFAMILY WRKY DNA-binding domain 79 140 IPR036576 GO:0003700|GO:0006355|GO:0043565
Trre4g02600 300 ProSiteProfiles WRKY domain profile. 76 141 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trre4g02600 300 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 45 195 IPR044810 GO:0003700
Trre4g02600 300 MobiDBLite consensus disorder prediction 51 73 - -
Trre4g02600 300 Pfam WRKY DNA -binding domain 83 139 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre4g02600 Trre-Chr4 27166050 27169146 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre4g02600 62 138 WRKY Transcription Factor Family AT4G01250 62.963 1.18e-30 115
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Trre4g02600 WRKY 3.2e-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre4g02600 K13425 - gmx:100815829 137.502