Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre4g02574 ATGGAGTCATCTAGATTTGTAACTATGTTTATTTTGTTCTTGTTTTTCTTCATTCATTTAACATCTTGTGATTCAGATTCAATAAACATTCTTTCAGACAAAATTCTCCTTAACTGTGGTTCATCTGAATCATCACCATTCAATGGTGTCAATTGGATAGGAGATATTGGAACAACTTTCTTGCCTCCATCATATGAAACACTCTTACTCTCAAACATAAACAAAGTAGCACCAAAAATTCCTTACTCAACAGCAAGAATAATTCCTCATTCTTCATTCACCTACTCTTTTCCTTTCTCTTCTTCTGGTCTTAAATTCATTCGTTTATATTTTCTCTCAACTACATATTTACCAATATACCCTTCCAACTCAAATTCATACTTTTCTGTCAAATCTGGTGCATACACTCTTGTTAACAATTTCAATCCATTACTTGCTGCACAAGAAATCAACTCACCTTATATCACCAAAGATTTCTTTGTCAACATCAAAGAAAAGAAACTCAACATAACTTTTACTCCATCTCCTCAAATTCCCAAAGCTTTTGCTTTTATAAATGGAATTGAAACATTCTCTGTACCCAACAATTTATTCTCTCGTCATGCTTCAAATTCTAATGTTTCTGTTCCTTATCTTGGACAAAAAGAACGGTTTTTTATCAACAATGAATATGCTTTTGAGAAGCTTTACATGGTTCACATGGGAAATGGAGTTAACCCTGATGTTAAAAATGAATTTGGGTCATGGCAAGATGATAAAAACTACATTTCTGGTTCACAATATGGAACTGTTCTTGTCTTGAGAGATGGTAGAGTTAATATGAATGATAGTTTTCTGAATTCAAATGACTATAACTATTCAGCACCAGAAAATTTATATTGGTCTGCAAGAACAATGAGTAGTAGCAGTGAAAATTTAACATGGTCATTTTCGGTTGATTCTGGATTCAAGTATCTTGTTAGGCTTCATTTTTGTGAGATATCTATGTTGGTAACAGATATTAATCAGAGGGTTTTTAGTGTTTATATAAACAACCAAACAGCCGAGGAAAAATTCGATTTAGTTGCTTTGGTTGGTGAACCTTTAAGTCCTTTGTATAGAGACTATGTTGTAAGGGTTCCTATTGAGACTGAGAGAAGGAAAGTTTTCTTGTTGATCTCACTTCATCCCAATTTGGAGTCAAAACCAAAGTATGCTGATGCTATATTGAATGGAGTTGAAATTAGTAAGTTAAGTGATAGTAATTATAATCTTGCTTCAAGTTTTCAATTGAAGAATGAAGAACTTCACAAGAAGAAGAAGAAATTTCCAATTTTTATTGTTGTGGGGGCTAGTACTTTAGGTTCCATTTTGGGACTTTTCATAACATTTTTCATTCTTAGAAGAAAAGAATGGAGAAATATAAAAATTGGAACTTTTCAGGTTCATACATTGAATTCTACTGCCACAAGTGAAGAAAAGGTGATATCAGGTAATTGCTATCAATTCACTTTAGCAGAGATTATATCAGCAACAAGTAACTTCAATGAAGATCTTGTGATTGGAGAAGGAGGTTTTGGAAAGGTATACAAAGGAATCATCATGCTTGATGATGGAGTGACTGATCATGTGGCCATAAAGCGCGCTAAGCCGAGTTCGCGTCAAGGATTTAAGGAATTTCAAAATGAGATAAACTTTCATTCATTTTATCACATGAATTTAGTTTCATTGTTGGGATACTGCCAAGAGAGCAATGAACTGATACTTGTGTATGAATACATGACTGAAGGTCCACTTTGTGATCATTTGAATAAGAAACAGAAGCAGCCACTTTCTTGGAATCAAAGACTAGAGATTTGTATTGGTGCAGCTAGGGGAATCCATTACCTTCATACAGGCAGAAATAATCCGGTGATTCACCGTGACATCAAGTCGTCGAACATATTATTGGATCAGAATTTGGTTCCAAAGATTGCAGATTTTGGGTTGTCTAGAATGGTTGATTCCATTTACCACACTCATGTTAGTACTGAGGTTAAAGGTACTTTTGGATATTTGGATCCTGAGTACTATAAGAGAAGAAAATTGAGTGAAAAAAGTGATGTTTATTCATTTGGAGTGGTTTTGTTTGAAGTGTTTAGTGGAAGAGGAGCAGTGAATCCTATGGCAATGGAAGATGAAAATGAGAAAGTTGGTTTGGTAGAATGGGCTATGCATTGTTACCAATCTGGAACTATTGATAGTTTGGTTGATTCTTCTTTAGAAAGAAAAATAAGTTTAGAGTGCTTAAAAGACTTTGTGGAAATTGGCATTCAGTGCTTGGCTAACAAAAGTGCAGAAAGGCCAACTATGGGAGAGGTGCTGAGTAGTTTGGAGAAAATTCTCTCCTTGCAGAAAAGTTTGGAGGGGCAGGAAATCAATGCAGTCGAGATGGATATGTAG 2421 0.3461 MESSRFVTMFILFLFFFIHLTSCDSDSINILSDKILLNCGSSESSPFNGVNWIGDIGTTFLPPSYETLLLSNINKVAPKIPYSTARIIPHSSFTYSFPFSSSGLKFIRLYFLSTTYLPIYPSNSNSYFSVKSGAYTLVNNFNPLLAAQEINSPYITKDFFVNIKEKKLNITFTPSPQIPKAFAFINGIETFSVPNNLFSRHASNSNVSVPYLGQKERFFINNEYAFEKLYMVHMGNGVNPDVKNEFGSWQDDKNYISGSQYGTVLVLRDGRVNMNDSFLNSNDYNYSAPENLYWSARTMSSSSENLTWSFSVDSGFKYLVRLHFCEISMLVTDINQRVFSVYINNQTAEEKFDLVALVGEPLSPLYRDYVVRVPIETERRKVFLLISLHPNLESKPKYADAILNGVEISKLSDSNYNLASSFQLKNEELHKKKKKFPIFIVVGASTLGSILGLFITFFILRRKEWRNIKIGTFQVHTLNSTATSEEKVISGNCYQFTLAEIISATSNFNEDLVIGEGGFGKVYKGIIMLDDGVTDHVAIKRAKPSSRQGFKEFQNEINFHSFYHMNLVSLLGYCQESNELILVYEYMTEGPLCDHLNKKQKQPLSWNQRLEICIGAARGIHYLHTGRNNPVIHRDIKSSNILLDQNLVPKIADFGLSRMVDSIYHTHVSTEVKGTFGYLDPEYYKRRKLSEKSDVYSFGVVLFEVFSGRGAVNPMAMEDENEKVGLVEWAMHCYQSGTIDSLVDSSLERKISLECLKDFVEIGIQCLANKSAERPTMGEVLSSLEKILSLQKSLEGQEINAVEMDM 806
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre4g02574 806 ProSiteProfiles Protein kinase domain profile. 508 788 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre4g02574 806 FunFam Receptor-like protein kinase FERONIA 587 805 - -
Trre4g02574 806 ProSitePatterns Protein kinases ATP-binding region signature. 514 540 IPR017441 GO:0005524
Trre4g02574 806 FunFam FERONIA receptor-like kinase 224 412 - -
Trre4g02574 806 SUPERFAMILY Protein kinase-like (PK-like) 481 784 IPR011009 -
Trre4g02574 806 CDD STKc_IRAK 514 787 - -
Trre4g02574 806 Gene3D Phosphorylase Kinase; domain 1 468 586 - -
Trre4g02574 806 SMART serkin_6 508 788 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre4g02574 806 FunFam receptor-like protein kinase FERONIA 472 586 - -
Trre4g02574 806 Pfam Protein tyrosine and serine/threonine kinase 513 784 IPR001245 GO:0004672|GO:0006468
Trre4g02574 806 Gene3D - 227 411 - -
Trre4g02574 806 Gene3D - 35 193 - -
Trre4g02574 806 Gene3D Transferase(Phosphotransferase) domain 1 587 804 - -
Trre4g02574 806 PANTHER OS07G0166700 PROTEIN 492 791 IPR045272 GO:0004714|GO:0006468
Trre4g02574 806 FunFam FERONIA receptor-like kinase 34 194 - -
Trre4g02574 806 Pfam Malectin-like domain 37 410 IPR024788 -
Trre4g02574 806 ProSitePatterns Serine/Threonine protein kinases active-site signature. 631 643 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre4g02574 Trre-Chr4 26775651 26778071 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre4g02574 32 806 Receptor kinase-like Gene Family AT3G51550 42.336 0.0 593
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Trre4g02574 Malectin_like 6.8e-29 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre4g02574 - - tpra:123911550 1393.25