Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre4g02525 ATGGAAAAAGTTGCAAAACTAACAAAGCTTAAGTCAGTGCTCAAGAAATGGAACACCTTCACCTATTACAACAGCAATAAACACAACCGCTCCAGCATAAGAGCGGTTGCAAACGAAGATGTTGACTCATGTGCGTTGTCGGGACAAGATCTTCGCCCAGTGTTTGTTGGAAAGACGCGAAGGCGGTACCTTGTTAATTCAGCGGTTGTTGGACATCCGCTTTTCCGGGAGCTTGTGGATAGGTCTCGTGACACGACCGAGGTGAACAACGATGACGATGAGGTTAATGTGGCTTGCGAGGTTGTTCTATTCGAGCATATGTTGTGGATGCTCGAAAATTCTGATCCTCAACCAGAATCGTTGGATGAACTTGTTGATTATTACAGTTGCTAG 393 0.4529 MEKVAKLTKLKSVLKKWNTFTYYNSNKHNRSSIRAVANEDVDSCALSGQDLRPVFVGKTRRRYLVNSAVVGHPLFRELVDRSRDTTEVNNDDDEVNVACEVVLFEHMLWMLENSDPQPESLDELVDYYSC 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre4g02525 130 PANTHER EXPRESSED PROTEIN 30 129 - -
Trre4g02525 130 Pfam Auxin responsive protein 10 111 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre4g02525 Trre-Chr4 25947598 25947990 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre4g02525 4 113 Calmodulin-binding Proteins AT3G43120 23.704 6.28e-07 44.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre4g02525 - - mtr:25486572 220.32