Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre4g02514 ATGGAATACGGTGGAGACTCGAAATTAACTGGGATTAGACAGATTGTGAGACTAAAAGAATTACTTCAAAAATGGCAAAATGTCACATTAGGTCCGAAACCTCCGATACCGAGACTTGAAGAAGCTGATGATGGTATGAGATCACCGATAATCAACAAAAGGATAACGAATCTCCAAAGTTGTGACTCTGATGAAGAAACCTGTAAAACTCCTGATCCTGAACCACCCCATGATGTCCCAAAAGGTTACTTGGCTGTCTATGTTGGACCCGAGCTTCGTCGGTTCATTATTCCAACTAGCTACCTTAGTCATTCGTTATTCAAAATGTTGCTCGAAAAGGCTGCTGAGGAATTCGGGTTTGATCAGAGTGGCGGGCTCACAATACCGTGTGAGATTGAGACCTTTAAATACCTCATCAAATGCATCGAGACCCAAGAGAAAGAACAACATGATGATGCCTCATTTGGAAACTCAGAACCAGAACAAGAAGAAACCTTGGAAGAGTAA 507 0.4201 MEYGGDSKLTGIRQIVRLKELLQKWQNVTLGPKPPIPRLEEADDGMRSPIINKRITNLQSCDSDEETCKTPDPEPPHDVPKGYLAVYVGPELRRFIIPTSYLSHSLFKMLLEKAAEEFGFDQSGGLTIPCEIETFKYLIKCIETQEKEQHDDASFGNSEPEQEETLEE 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre4g02514 168 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 62 138 IPR003676 GO:0009733
Trre4g02514 168 MobiDBLite consensus disorder prediction 147 168 - -
Trre4g02514 168 Pfam Auxin responsive protein 60 142 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre4g02514 Trre-Chr4 25782224 25782989 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre4g02514 1 162 Calmodulin-binding Proteins AT5G20810 66.463 5.51e-74 218
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre4g02514 K14488 - cpap:110808074 229.565