Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Trre4g02506 | ATGATGAAGACAGGTCCGTGTATGCATTGCGGAATTAATTCAACTCCACTTTGGCGTAATGGACCAAATGAAAAGCCCGTTTTATGCAATGCTTGCGGGTCTCATTTCAAGGCCAGAGGAACCCTTGAAAACTATCTCCCTAGGATTGTCCAACAAGCTCAATTGTTAGAGCATAACAATCAAGAAAAATGTGAACACAATGTTCAACTTAACATTGATGAAGCTGCATCTGAAAAAAGTTTCGAGTTTTCAACTTCATCTTCTTCAGGTGTGACCAATACAAATTTATGGAACACCGAAATCTCTCAAAAGAAACATTCATTTGGAAGGCGGGAGAGGGAGACATTGACACCAATGGAGGAGTTCCAGAAAGAACTGCTCAGTCTATATGAATCTGAAAAACAATCCAAAGAATTATCTCCAGACGATATTTTGTTGTATGATAATGTGAACAACTTCATACCCAATAACGAGATAGGTCTTGGATGCACTCTCTTGAATGCAAATGTCACTTCTACTGATGAAGACCAACGGAAACCATGA | 543 | 0.3923 | MMKTGPCMHCGINSTPLWRNGPNEKPVLCNACGSHFKARGTLENYLPRIVQQAQLLEHNNQEKCEHNVQLNIDEAASEKSFEFSTSSSSGVTNTNLWNTEISQKKHSFGRRERETLTPMEEFQKELLSLYESEKQSKELSPDDILLYDNVNNFIPNNEIGLGCTLLNANVTSTDEDQRKP | 180 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Trre4g02506 | 180 | SUPERFAMILY | Glucocorticoid receptor-like (DNA-binding domain) | 6 | 44 | - | - | |
Trre4g02506 | 180 | CDD | ZnF_GATA | 6 | 41 | IPR000679 | GO:0006355|GO:0043565 | |
Trre4g02506 | 180 | ProSitePatterns | GATA-type zinc finger domain. | 7 | 32 | IPR000679 | GO:0006355|GO:0043565 | |
Trre4g02506 | 180 | PANTHER | OSJNBB0038F03.10 PROTEIN | 7 | 174 | IPR044589 | - | |
Trre4g02506 | 180 | Pfam | GATA zinc finger | 7 | 41 | IPR000679 | GO:0006355|GO:0043565 | |
Trre4g02506 | 180 | Gene3D | - | 2 | 69 | IPR013088 | GO:0006355|GO:0008270 | |
Trre4g02506 | 180 | SMART | GATA_3 | 1 | 53 | IPR000679 | GO:0006355|GO:0043565 | |
Trre4g02506 | 180 | ProSiteProfiles | GATA-type zinc finger domain profile. | 7 | 40 | IPR000679 | GO:0006355|GO:0043565 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Trre4g02506 | Trre-Chr4 | 25579962 | 25581977 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Trre4g02506 | 1 | 166 | C2C2-Gata Transcription Factor Family | AT4G17570 | 29.358 | 2.43e-20 | 85.5 |