Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre4g02503 ATGCTTCAAATCCAAGGCTACTTAGCATTATTCCTTTTATGGTTCATTTCAACAATTTTCATTAGATCACTTTTCAAAAAATCTGAATGTTATAAATTACCACCTGGTCCCCCAATTTCATTACCTATCTTAGGACATGCACCTTATCTTAGATCACTTCTTCATACATCACTTTACAAACTTTCAATTCGTTATGGCCCTTTAATGCATATTATGCTTGGTTCACAACATGTCATAGTTGCATCATCAGCTGAAAGTGCTAAACAAATTTTGAAAACTTGTGAAGAGTCTTTCATCAATAGACCAATTATGATTGCTAGTGAGAATTTAACATATGGTGCTGCTGATTATTTTTTCATACCTTATGGTACTTATTGGAGGTTTCTTAAGAAGCTCTGTATGACAGAGCTTCTCAGCGGGAAAACTCTCGAACACTTTGTTAGTATTCGAGAGGATGAAATTAAGTGTTTTTTAGGTACCCTTTTGGATATATCTAAAAGTGGTAAACCAATTGAAATGAGGCATGAACTTATTAGACATACTAATAATATCATTTCTAGAATGACTATGGGAAAAAAGAGTAATGGTATGAATGATGAAGTTGGTGAGTTGAGAAAAGTGATTAGGGAAATTGGTGAACTTCTTGGTGCTTTTAATTTAGGTGACATTATTGGATTTATGAGACCTTTTGATTTACAAGGATTTGGAAAAAGGAATAGAGATACACATCATAAGATGGATTTGATGATGGAGAAAGTGTTGAAGGAACATGAAGAGGTTAGAGCTATAGAAGGTGCTGGTAGTGATAGAAAGAAGGATCTGTTTGATATTTTGTTGAACTTGATTGAAGCTGATGGAAGTAAACTCACTAGACAAAGTGCTAAAGCTTTTGCTCTGGACATAAAGCAAAGAAATAAAAGAAGAAAACGAAGCAGCAGTTATACTTACAGCAAGAGGGTAGACATTGCCTTTAGTTCCGAAGGCCATGAATACTGCTTTGGTTTTTCTTCTCTCCATTCTTTTATGTCGACGGCAGGTGGAGGGTTGAAGCGGCACTCAAACGGTGGTTGGTTTGGTGGTTTCGTGGAGCGACGGTGGAGCGGCAAACAGAGAGTTTCGTGGTCGGTGGTGGTGGTTGTGGTGGTGGTGGCTTTCTCAGATGAAAGTTTAAAAACGTGA 1179 0.3698 MLQIQGYLALFLLWFISTIFIRSLFKKSECYKLPPGPPISLPILGHAPYLRSLLHTSLYKLSIRYGPLMHIMLGSQHVIVASSAESAKQILKTCEESFINRPIMIASENLTYGAADYFFIPYGTYWRFLKKLCMTELLSGKTLEHFVSIREDEIKCFLGTLLDISKSGKPIEMRHELIRHTNNIISRMTMGKKSNGMNDEVGELRKVIREIGELLGAFNLGDIIGFMRPFDLQGFGKRNRDTHHKMDLMMEKVLKEHEEVRAIEGAGSDRKKDLFDILLNLIEADGSKLTRQSAKAFALDIKQRNKRRKRSSSYTYSKRVDIAFSSEGHEYCFGFSSLHSFMSTAGGGLKRHSNGGWFGGFVERRWSGKQRVSWSVVVVVVVVAFSDESLKT 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre4g02503 392 SUPERFAMILY Cytochrome P450 34 301 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre4g02503 392 Pfam Cytochrome P450 34 300 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre4g02503 392 PANTHER CYTOCHROME P450 93A3-LIKE 11 301 - -
Trre4g02503 392 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre4g02503 392 PRINTS E-class P450 group I signature 86 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre4g02503 392 PRINTS E-class P450 group I signature 180 198 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre4g02503 392 Gene3D Cytochrome P450 25 301 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre4g02503 Trre-Chr4 25510280 25515992 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre4g02503 1 301 Cytochrome P450 AT5G06900 36.808 2.24e-64 212
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre4g02503 K24188 - ccaj:109793235 481.485