Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre4g02491 ATGCAAACCCTTCTCAAACTCACTGCTCTCTTACTCTTCTTCTTCTTCACTTTCTCAGCCTCCATCTCGTCCCATGATGAAGCCCAAGCCCAAGATCTAGTCCGTTCCTCCTGCATTCACTCCAGGTACCCAAAGTTATGTCTCCGAACACTCTCAAACTACACCGGGCCAGCTAAAAGCCCATTAGACATAGCCCAGGCAGCACTCCGGGTAAGTTTAGCCCACGCCAAAAGAGCCTCCAAATATCTACTGTCTTCCAAAGGTGGGTCCCACAGCAGCAGCTTAAGTAGAAGGCAGCAGGCTGATCTAAGTGACTGCAAAGAGCAGATTGCTGATTCAATCGATGAACTTCGTAAGAGTTTAGAGGAGTTGCGACATCTGCGACCGGAAACGTTCCGGTGGCAGATGAGCAACGCCTTGACTTGGGTAAGTGCCGCACTTACCGACGGCGACACTTGCCTTGATGGGAATGTGAGGCCTGATGTTAAAAAGAGAGTTACTGATCTTGCTAGGGTAACTAGTAATGCTCTTTACATGATCAATCGTGTTGGAAATGGGAAGTTCAAGAGTCGTTCAGGATCTAAAAACTGA 591 0.4822 MQTLLKLTALLLFFFFTFSASISSHDEAQAQDLVRSSCIHSRYPKLCLRTLSNYTGPAKSPLDIAQAALRVSLAHAKRASKYLLSSKGGSHSSSLSRRQQADLSDCKEQIADSIDELRKSLEELRHLRPETFRWQMSNALTWVSAALTDGDTCLDGNVRPDVKKRVTDLARVTSNALYMINRVGNGKFKSRSGSKN 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre4g02491 196 SMART PMEI_2 29 179 IPR006501 GO:0004857
Trre4g02491 196 Coils Coil 107 127 - -
Trre4g02491 196 Pfam Plant invertase/pectin methylesterase inhibitor 32 178 IPR006501 GO:0004857
Trre4g02491 196 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 31 183 IPR035513 -
Trre4g02491 196 PANTHER PECTINESTERASE INHIBITOR-LIKE 10 178 - -
Trre4g02491 196 Gene3D Invertase/pectin methylesterase inhibitor family protein 28 183 IPR035513 -
Trre4g02491 196 NCBIfam pectinesterase inhibitor domain 8 181 IPR006501 GO:0004857
Trre4g02491 196 FunFam Pectinesterase inhibitor 3 29 184 - -
Trre4g02491 196 CDD PMEI-like_3 36 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre4g02491 Trre-Chr4 25104781 25105371 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre4g02491 33 180 Carbohydrate Esterase AT3G14310 32.099 2.56e-16 74.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre4g02491 - - mtr:25486551 248.44