Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre4g02355 ATGTCACCTATGTCAACTATTTCAATTCAAAAACCTGAATTTCATATCTTACTTTTCAACGGATCTCCAACTAATTACAAATGCACAAAAATTACCTCTTCATGGAACATGTCTATGGATTCCAAAAATTCATCAACAATGGATAGTAATCGTGATATGAAGAATTTGAAGAAGAAAGATGAATTTTCAGTGAAGCTTTCGATGACGCCGGTTCGGAAAGTGGATGAAACTTTGAGCTCAAATGGTCTTCAATTCGACCGGTTACAGCCGTCGGATCAAGAGTTAGTTCGAGAAAATAGGTTTGAGTTTGGGCAGTTTGTAGCTAGAGAAGCTGTGCTTGATGAAGAATATTGGACAGCAGCCTGGCTAAGGGCAGAAAGTCATTGGGAGAATCGAACATATGAAAGATATATTGATATCTACAAAAGGAAATTCGCTGACCAGGAATTTAATGCGGTAAAAAGGCGGTGCAAGGTGCAAAATGGAGATCCATGTGCATGCATTATCGCGGTGAGGAAGGAGCAGAAGAATGTAAAGCGCTCGATAATTAAAAGTGTTGTAGGAACACTTGATTTGAATATCCGATATTTGCTGCAAGGAGAGACTTTTCCTGGGGAACGAGTCAAGACTCCTTTTTGTTGCAGCACAAACAGGACACCATTGAGTAGATATGGTTACATTGCAAACTTGTGTGTTGCCAAATCGGCTCGTCGACAAGGAATTGCAAGCAACATGATGTATTTTGCTGTTGAATGTGCAAAATCTAATGGTGTGAGACAAGTATATGTACATGTTGACAGAAATAATACGCCTGCACAATTATTGTACCAAAAGATGGGATTCGAGATGGTTGAAACCGCAAACTCGCGGTTGTTACTAGAAGAAACATACTTGCTACGGTTGCAGACATAA 912 0.3958 MSPMSTISIQKPEFHILLFNGSPTNYKCTKITSSWNMSMDSKNSSTMDSNRDMKNLKKKDEFSVKLSMTPVRKVDETLSSNGLQFDRLQPSDQELVRENRFEFGQFVAREAVLDEEYWTAAWLRAESHWENRTYERYIDIYKRKFADQEFNAVKRRCKVQNGDPCACIIAVRKEQKNVKRSIIKSVVGTLDLNIRYLLQGETFPGERVKTPFCCSTNRTPLSRYGYIANLCVAKSARRQGIASNMMYFAVECAKSNGVRQVYVHVDRNNTPAQLLYQKMGFEMVETANSRLLLEETYLLRLQT 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre4g02355 303 Gene3D - 112 297 - -
Trre4g02355 303 Pfam Acetyltransferase (GNAT) family 161 281 IPR000182 GO:0016747
Trre4g02355 303 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 135 286 IPR016181 -
Trre4g02355 303 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 219 303 IPR000182 GO:0016747
Trre4g02355 303 CDD NAT_SF 212 264 - -
Trre4g02355 303 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 4 302 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre4g02355 Trre-Chr4 22454710 22457512 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Trre4g02355 Acetyltransf_1 5.1e-13 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre4g02355 - - mtr:25486506 489.189