Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre4g02341 ATGGCTCGAGTGAGGACTACTCCACGACCAAGGTCACCATTAGTACTGCCGAAACTAACGGTACAAAAACCGGTTCCCCCTATGCAAAACAACATTTGCACTAGACAGAGTCCAGCGAAGGAAATCCAATATCGCGGTGTTCGAAAGCGACCAAAGGAAGCAGCACGTGCTTATGACCAAAAAGCAATTGTATTCCGTGGGGAAATGGCTAAAACTAATTTCCCAATCTCCGAATACATATTTGATGATGCTCAGATTCCTCCTGCTGCTCCTCCTGATCAGATACCTCAATCTACTGCTCCTCTGGCTAACGATTGTGAGACTAGTGAATGTCATTCCTTAGGTTTCTAA 351 0.453 MARVRTTPRPRSPLVLPKLTVQKPVPPMQNNICTRQSPAKEIQYRGVRKRPKEAARAYDQKAIVFRGEMAKTNFPISEYIFDDAQIPPAAPPDQIPQSTAPLANDCETSECHSLGF 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre4g02341 116 MobiDBLite consensus disorder prediction 85 116 - -
Trre4g02341 116 SUPERFAMILY DNA-binding domain 43 77 IPR016177 GO:0003677
Trre4g02341 116 SMART rav1_2 43 81 IPR001471 GO:0003700|GO:0006355
Trre4g02341 116 Gene3D AP2/ERF domain 49 77 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre4g02341 Trre-Chr4 22205122 22205546 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre4g02341 39 79 AP2-EREBP Transcription Factor Family AT1G03800 40.909 2.64e-08 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre4g02341 K09286 - tpra:123904184 63.1586