Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre4g02296 ATGAGGATGTGGGAGCAACTTGAATCTAATGGTGTGGTGATTTCTAAGCATCAGCATGGTCAACAAGAAGTTCAAGTACATATGGATTTGGTGAGAAGGGCAAGCCAGCTCATGGTGATGAAGATCAGCATAGGTCATTTGGATGAGAGCAGTCTTTACAATTGTCAATACTCGACTTTTGCTCTCTGTGGCTTTACTCGTGCTCAGCTCTATGAAAAGCAGGATTGA 228 0.4298 MRMWEQLESNGVVISKHQHGQQEVQVHMDLVRRASQLMVMKISIGHLDESSLYNCQYSTFALCGFTRAQLYEKQD 75
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre4g02296 75 Gene3D - 22 72 IPR038579 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre4g02296 Trre-Chr4 21687404 21688202 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre4g02296 40 69 Cytoplasmic Ribosomal Protein Gene Family AT5G27700 60.000 3.14e-09 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre4g02296 K02971 - psat:127120240 52.373