Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre4g02294 ATGAGGATGTGGGAGCAACTTGAATCTAATGGTGTGGTGATTTCTAAGCATCAGCATGGTCAACAAGAAGTTCAAGTACATATGGATTTGGTGAGAAGGGCAAGCCAGCTCATGGTGATGAAGATCAGCATAGGTCATTTGGATGAGAGCAGTCTTTACAATTGTCAATACTCGACTTTTGCTCTCTGTGGCTTTACTCGTGCTCAGGTGGATCAAGATTCATAA 225 0.4267 MRMWEQLESNGVVISKHQHGQQEVQVHMDLVRRASQLMVMKISIGHLDESSLYNCQYSTFALCGFTRAQVDQDS 74
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre4g02294 74 Gene3D - 9 74 IPR038579 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre4g02294 Trre-Chr4 21687404 21688244 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre4g02294 40 74 Cytoplasmic Ribosomal Protein Gene Family AT5G27700 60.000 3.62e-11 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre4g02294 K02971 - han:110890464 54.299