Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre4g02287 ATGGGGAAGTATAATTTACCAAATGAAAGGAAAAAAGATTGGCTTGGTGCACTTTTGATAGATAACTTTGGTAATTGCATGAACCATCAAGAAATGTTTAATGAGAAGAATGTGTTTTGTGTAGATTGTGGAATGAGTTTATGTAGACATGGTGAGGAATCTCATTCTCTGCATCAAAGGTTTCAAATTTACAAATATTGTTATCAAGATGTTGTCAAATATTCTGACCTACTCAAGTATTTTGAATGCTCAAATATTCAGACATATATATCAAACAAACACAAGACTGTGCATCTCAAACCTCGACCTTTATCAAAAGAAAAGAAAGAAGCAATAAAACCTAAAGTTCCTAGTTTAAGCCATGAGTCTCAAATCAAGGAAACAAAAACATCAACATCTCATAATAAGCTTGGTGGAATTTGTGAAGAATGTGGCAAACATTTACAAGACAAGCGTAACCGATTTTGTTCCCTTAGATGCAAGATGTCAATTGAAAGAGTGAATTTCAGAAAGCATCCAAGGAAAAGCACCCCTATGAGATCTCTCTAG 549 0.3388 MGKYNLPNERKKDWLGALLIDNFGNCMNHQEMFNEKNVFCVDCGMSLCRHGEESHSLHQRFQIYKYCYQDVVKYSDLLKYFECSNIQTYISNKHKTVHLKPRPLSKEKKEAIKPKVPSLSHESQIKETKTSTSHNKLGGICEECGKHLQDKRNRFCSLRCKMSIERVNFRKHPRKSTPMRSL 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre4g02287 182 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 9 162 - -
Trre4g02287 182 MobiDBLite consensus disorder prediction 108 129 - -
Trre4g02287 182 Pfam PLATZ transcription factor 65 162 IPR006734 -
Trre4g02287 182 MobiDBLite consensus disorder prediction 108 122 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre4g02287 Trre-Chr4 21623238 21626190 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Trre4g02287 PLATZ 2.8e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre4g02287 - - mtr:25482577 217.624