LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Trre4g02265	ATGGGCAGAGAAATCGTGAAGCAGGAATCACCATCGGAGCCTGGAAGACGCAGTAGATTATGGTTTGATGACGACATAGTTCATGTTTTGGAAGAAAAGACGGGCACTGATACAATTGAAGTCATAATCATCAACTTATGCAATGACAAAGAAGTGCAGTGGAGTGGAAAATCCTTCAAGAAGATGAAAAACCTGAAAATTCTTATAGTTAGAAGCGCACGGTTTTCTAGGGGCCCTCAAAAACTACCAAACAGTTTGAGAGTTCTAGACTGGAGTGGATATCCATCAGATTCCTTACCAGCTGATTTTAATCCTAAGAATCTAATGATACTTAGTTTGCCTGAAAGTTGCCTTATATTGTTCAAATCGCTCAAGGTGTTTGAGTCTTTGAACTTTCTGGACTTTGAAGGCTGCAAGTTATTAACCGAGCTGCCTAGCTTGTCTGCTCTACCAAATTTGGGGGCACTGTGTCTTGACAATTGCACTAATTTAATTACGATTCATAAGTCAGTCGGTTTTCTTGAAAGACTCGTGTTATTGAGTACTCAAGGATGCAACCAGCTAGAAATTTTGGTGCCCTGCATCAATATGTCATCTCTAGAGACTCTAGATATGAGGGGTTGCTCGCGTCTCAAGAGCTTCCCGGAAGTTTTGGGAGTAATGGAGAATATAAGAGATGTTTATCTAGACCGTACTTCCATAGATAAGTTGCCATTTTCAGTTGGAAATCTTGTTGGCCTCCAACGATTGTTCTTGAGGGAATGCAAGAACCTAACTCAACTACCGGACAGTATTCGTATATTGCCTAAACTTGAGATAATAATGTTTTATGATTGTAGAGGATTTCAATTGTTTGAGGATAAAGAAAAAGTTGGTTCAAAAGTGTTTCCAAAAACCATGCTTGTTTTTAATGAAGGAAAGGGGACAATGCTTGATGTGTGTTCTCTTAACATATGTGCCAATAATGCCATAGAAGTATGCGAACCTAATCAAGAAATCATCGCCAATAATGATTTCGGATTCGTGTTTAAAGGGATTTTTGAAGGGAGAGTAAATTGGTACCAGCAAGGAAACAAGAAACCATCGTTGTGTTTTTGGTTTCAAAAGAAATTCCCTCGGATAATTCTATGTTGTGCTGGAGAACCTCCAATAAATAAAGACAATATGGTATTGGATTTCAAGTTGAGTGTACTCATCAATGGCAGTAAGCAATTCAGTTCTTCATGTAACTACATATTTTCTGCAGGAAGGAAATCAGACCAAATACTTATGTGTGATTTAGTGTGCAAAGGGGAAAGATCATATTTAGAGCATGAATGGAATAAAGTAGAGATTTTATATGAGTTCAAATACCCTATGCCATTAGGCTCTGAAAGAATAATGGCCAACCATGATAGGACCACAACAAGAAATCCAAGTTGGTCCCTCATTTATGTCTGTCAAGATATCAAAGAGGATGTCAAATTTATGTCTGAGTTTATGGAATGCAAAGAGGATGAGAGAAGAAAGGAAACACTATTGGGTGTTCACTCTATGCTCAAGCATCATGGATTTGATTGGATTGGGTTTTGA	1572	0.3823	MGREIVKQESPSEPGRRSRLWFDDDIVHVLEEKTGTDTIEVIIINLCNDKEVQWSGKSFKKMKNLKILIVRSARFSRGPQKLPNSLRVLDWSGYPSDSLPADFNPKNLMILSLPESCLILFKSLKVFESLNFLDFEGCKLLTELPSLSALPNLGALCLDNCTNLITIHKSVGFLERLVLLSTQGCNQLEILVPCINMSSLETLDMRGCSRLKSFPEVLGVMENIRDVYLDRTSIDKLPFSVGNLVGLQRLFLRECKNLTQLPDSIRILPKLEIIMFYDCRGFQLFEDKEKVGSKVFPKTMLVFNEGKGTMLDVCSLNICANNAIEVCEPNQEIIANNDFGFVFKGIFEGRVNWYQQGNKKPSLCFWFQKKFPRIILCCAGEPPINKDNMVLDFKLSVLINGSKQFSSSCNYIFSAGRKSDQILMCDLVCKGERSYLEHEWNKVEILYEFKYPMPLGSERIMANHDRTTTRNPSWSLIYVCQDIKEDVKFMSEFMECKEDERRKETLLGVHSMLKHHGFDWIGF	523

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Trre4g02265	523	SUPERFAMILY	L domain-like	9	286	-	-
	Trre4g02265	523	PANTHER	LEUCINE-RICH REPEAT-CONTAINING PROTEIN	1	286	IPR044974	GO:0006952
	Trre4g02265	523	Gene3D	Ribonuclease Inhibitor	31	300	IPR032675	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Trre4g02265	Trre-Chr4	21298229	21300153	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Trre4g02265	2	290	WRKY Transcription Factor Family	AT4G12020	37.255	6.06e-47	174

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Trre4g02265	-		-	mtr:11441658	744.962