Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre4g02238 ATGGAAGCTACTGTGAGAGCCTTGGATGAGCAGAAATCTGAGCTTGAAAAGGTCATTGCTGCTTTGAAAAAGGAGGAAGCTGAGGAAGAAGGGTTAATGGCTAAGAATGCAGGTGATGATGTTGCAGGTGATGGTACTGATGATGCTGTTGGTGATGCAGCTGGTACTAATGTTGATGATGAAGGAGGTGACACTGAGGAGCTGGAAAGCATTCAATACATCATTCTGGAGAGCGATAATCTATCGTCCTTATTTCCGGATGCAAGCTTAAATTTGGGTGGATTTAAATTGAATGTGCACATTCTATTTGCAGGTCATTGTCCGGTTCTCTTGGGTCGGAAGCGGCTCCGTTTCTAA 357 0.4426 MEATVRALDEQKSELEKVIAALKKEEAEEEGLMAKNAGDDVAGDGTDDAVGDAAGTNVDDEGGDTEELESIQYIILESDNLSSLFPDASLNLGGFKLNVHILFAGHCPVLLGRKRLRF 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre4g02238 118 MobiDBLite consensus disorder prediction 29 63 - -
Trre4g02238 118 Coils Coil 5 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre4g02238 Trre-Chr4 20972494 20974796 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre4g02238 70 104 Amino Acid or Auxin Permease AAAP Family AT3G54830 65.714 9.41e-10 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre4g02238 K15015 - fve:101313739 58.5362