Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre4g02236 ATGGGTGTTGTTAGAATCCTCTCTTCAGATACAATCAAGGCATCAAAATCAAGTAATCAAACAATTGATTTAACTCCATGGGATCTTCAGTTTCTAACTGCTTCACCCAACAAAAAGGGTCTTCTTTATCATCAGGTTGTAGCAAACCAAATCGAACGGTTTAGAAATTCTTTATCCTCTTCTCTTGTCTTTTTTCAACCTCTTGCTGGCCGTCTTGAAATAAAGGAACACGAAGACAATGTTTCTTCGTGTTCCATAAAGTGCAACAATGTAGGTGTACTTTTTATCCATGCAACGGCAGAAAATACTTGTGTGTCTGACATTGTTGGACCCACTTATGTTCCTTCGATTGTTGATTCATTTTTTGCTTTTAACGGAGTTAGAAACTACGAAGGCACGTCACAACCATTGTTGGCAGTGCAAGTCACGGAGTTAGTTGACGGCATCTTCATTGGTTGTACATTCAATCATGTGGCTGTTGACGGAAATTCCATGTGGCATTTCATTAATTCATGGGCTGAAATTTCACGCGGTTCGTGTGATCAAATATCCAAACCTCCAATACTTGAGCATTGGTTTCCAAATGGTATTCAACCTCCCATACAATTTCCATTCACTATGGAGCCACAAAATAATCCCTCTGATGCATCGAGTTTTTCATCATCTGATGAAGAAAAACTCTGTATATCAGAGAGATTATTCCATTTCAAAAAGGAGAAAATCGTGCAACTAAAATCAAAAGTCAATGCAGAGATTGGTAGTAGTACTAATAAAATATCTTCTCTACAAGCGCTTTTAACTCACCTTTGGTGTTCTGTGATCCGTTCCAAACAACTTGACCCACAAGAAGAAGTCCATCTTATGTTGATGATAGGAGTTAGACCAAGATTTGTTCCACCATTGCTAGAAGATTATTTTGGAAATGCAATTATAGGTGGTGGGATTAAAATGAAAGTTGAGGAGTTGTTGAAGGAAGGTGGACAATGTAAAGGTGCTTTGGAGATGAACAAGTTAATTGCTAAATACTCTAATGAGATGTTGAAGAATCACTATGAGTCTTGGTTGAAAAATCCAAATTTTGTTAGGCTTGCTAGCATGACAAACAATAATTTCTTGGCTATTGGCCATTCACCTTGGTTTGATGTTTATGGCAATGATTTTGGATGGGGAAAGCCTGTGGCAGTTCACAATGGAAATAAAATAAATGGTTTAGTTAATGTGTTTGCTGGAATAGAAGAAGGTAGTATTGATCTTAGAGTGTGTCTTCCTTACAAGAATTTGGAGGCAATGGGAAATGATCCTCAATTTATGGCTATTGTTTCCAACTAA 1329 0.374 MGVVRILSSDTIKASKSSNQTIDLTPWDLQFLTASPNKKGLLYHQVVANQIERFRNSLSSSLVFFQPLAGRLEIKEHEDNVSSCSIKCNNVGVLFIHATAENTCVSDIVGPTYVPSIVDSFFAFNGVRNYEGTSQPLLAVQVTELVDGIFIGCTFNHVAVDGNSMWHFINSWAEISRGSCDQISKPPILEHWFPNGIQPPIQFPFTMEPQNNPSDASSFSSSDEEKLCISERLFHFKKEKIVQLKSKVNAEIGSSTNKISSLQALLTHLWCSVIRSKQLDPQEEVHLMLMIGVRPRFVPPLLEDYFGNAIIGGGIKMKVEELLKEGGQCKGALEMNKLIAKYSNEMLKNHYESWLKNPNFVRLASMTNNNFLAIGHSPWFDVYGNDFGWGKPVAVHNGNKINGLVNVFAGIEEGSIDLRVCLPYKNLEAMGNDPQFMAIVSN 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre4g02236 442 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 6 437 - -
Trre4g02236 442 Pfam Transferase family 4 436 - -
Trre4g02236 442 Gene3D - 209 432 IPR023213 -
Trre4g02236 442 Gene3D - 3 199 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre4g02236 Trre-Chr4 20936284 20937612 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre4g02236 55 422 Monolignol Biosynthesis Gene Families AT5G48930 27.273 1.15e-29 118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre4g02236 - - adu:107480292 477.633