Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre4g02111 ATGTATGGTGAAGCAGAGGTTTACATAGTAACTGTTGAAGGTGAGCCTATCATAAGTTATACTGGTGGTGTTGAAGGGTTTGAAGCCACTGCTGTCGAGTCTGATGAGAAGATCGATACAACTAGTGAGTTGGTGACTTCTTATGCCCGACATCTTGAGAATAGACACGATATGCTTCTGGGGTTGCTGTTTGACCGTGGGACATATACGAAACTCTATAGCTATAAACATCTTATAAATGGGTTTGCAGTTCATATTTCCCCGGAACAGGTAGAAACTCTTCGACATGCTCCTGGTGTGAAATCTGTTGAGAGGGACTGGAAAGTGAAGAGACTTACAACACATACTCCACAATTTTTGGGACTTCCAACCAGTGTTTGGCCAACTGGAGGAGGCTGTGACCGGGCTGGAGAGGACATTGTGATCGGATTTGTGGACTCTGGAATATATCCTCACCACCCGAGTTTTTCTACTCATAATACTGAACCATATGGACCGCTTGCAAAATATAGAGGAAAATGTGAAGTTGATCCCAAAACTAAAAGAAGTTTCTGTAATGGGAAGATTATTGGAGCACAACATTTTGCTCAAGCTGCAATAGCTTCTGGAACGTTTAATCCTTCAATTGATTTTGCATCTCCTCTGGATGGAGATGGCCATGGAAGTCATACAGCCTCTATTGCAGCTGGAAGAAATGGAATACCTGTAAGGTTGTATGGACATGAATTCGGGAAAGCAAGTGGAATGGCTCCCCGTGCCAGGATTGCTGTGTACAAAGCGCTCTATAGACTATTTGGAGGGTTTGTTGCCGATGTAGTTGCTGCAATTGATCAGGCTGTACATGATGGAGTTGATATACTCAGCCTTTCAGTTGGACCAAATGGTCCACCAGCAGCTACCAAGACCACATTTTTGAATCCTTTTGATGCTACACTTCTTGGGGCTGTGAAAGCTGGTGTGTTTGTTGCACAGGCTGCGGGAAACGGCGGCCCTTTTCCCAAGTCATTAGTTTCATATAGTCCGTGGATAGTATCTGTAGCAGCTGCAATTGATGATCGTAGATATAAAAACCATCTGATCCTTGGAAATGGGAATATCTTAGCCGGACTTGGGTTGTCACCTTCTACACATTTAAACAACACATACACATTGGTTGCTGCAAATGACGTGCTGCTAGATTCTTCAGTTATGAAGTACAGCCCAACAGATTGCCAGAGACCTGAACTTTTAAACAAGAACTTGATAAAGGGGAAAATTCTTCTCTGTGGCTATTCTTTCAACTTTGTTGTTGGTACTGCTTCAATAAAGAAAGTCTCAGAAACAGCAAAGGCCCTTGGAGCAGTTGGATTTGTTCTCTGTGTAGAAAATGTTTCTCCTGGAACAAAATTTGATCCTGTCCCTGTTGGCCTTCCTGGGATTCTAATCACAGATGTTAGCAAGTCAAAGGAACTGATAGATTATTATAATATCTCCACACCGAGAGACTGGACTGGAAGAGTGAAGAGTTTCAATGGTAAAGGTAAAATTGAGGATGGTTTGATGCCCATTCTCCATAAATCTGCACCACAGGTGGCATTATTCTCTGCTAGAGGGCCAAATATAAAGGATTTCAGCTTCCAAGAAGCAGATCTTCTCAAACCAGATATATTAGCTCCAGGTTCATTGATTTGGGGTGCTTGGTCTCTAAACGGAACTGATGAGCCAAATTACGATGGAGAGGGATTTGCTATGGTGTCTGGAACTAGTATGGCTGCACCGCACATTGCTGGAATTGCTGCTCTTATAAAGCAGAAACATCCACGTTGGAGCCCTGCTGCCATTAAATCAGCTTTGCTTACAACATCAACAACTCTAGATAGGGCAGGAAACCCAATTCTAGCTCAGCAATATTCCGAAACAGAAGCTATGAATCTGGTCAGAGCCACTCCTTTTGATTATGGAAATGGGCACGTGAATCCAAAAGCAGCCTTGGACCCTGGGCTCATCTTTGATGCAGGATACAAAGACTATTTAGGATTCTTGTGCACAACACCTGGCATTGATTTTCATGAGATAAAGAAGTACACAAACTCACCATGTAACAGAACCATGGGTCACCCATATAATTTAAACACTCCATCAATTACAGTTTCACATCTCGTGAGAACTCAAGTTGTAACTCGCACAGTCACAAACGTTGCTAAACAAGAAACCTACGTGATGACGGCTAGAATGCAACCAGCAGTTGCCATTGAAGTCAACCCTCCGGCAATGACGATCAGAGCTGGCGCATCACGTAAGTTTACTGTAACACTTACCGTTCGATCAGTTACAGGAAGATATAGTTTTGGAGAGGTTTTAATGAAGGGAAGCAGAGGACACAAAGTAAGGATTCCTGTTCTGGCCAATGGATACTCAAGATAG 2403 0.4303 MYGEAEVYIVTVEGEPIISYTGGVEGFEATAVESDEKIDTTSELVTSYARHLENRHDMLLGLLFDRGTYTKLYSYKHLINGFAVHISPEQVETLRHAPGVKSVERDWKVKRLTTHTPQFLGLPTSVWPTGGGCDRAGEDIVIGFVDSGIYPHHPSFSTHNTEPYGPLAKYRGKCEVDPKTKRSFCNGKIIGAQHFAQAAIASGTFNPSIDFASPLDGDGHGSHTASIAAGRNGIPVRLYGHEFGKASGMAPRARIAVYKALYRLFGGFVADVVAAIDQAVHDGVDILSLSVGPNGPPAATKTTFLNPFDATLLGAVKAGVFVAQAAGNGGPFPKSLVSYSPWIVSVAAAIDDRRYKNHLILGNGNILAGLGLSPSTHLNNTYTLVAANDVLLDSSVMKYSPTDCQRPELLNKNLIKGKILLCGYSFNFVVGTASIKKVSETAKALGAVGFVLCVENVSPGTKFDPVPVGLPGILITDVSKSKELIDYYNISTPRDWTGRVKSFNGKGKIEDGLMPILHKSAPQVALFSARGPNIKDFSFQEADLLKPDILAPGSLIWGAWSLNGTDEPNYDGEGFAMVSGTSMAAPHIAGIAALIKQKHPRWSPAAIKSALLTTSTTLDRAGNPILAQQYSETEAMNLVRATPFDYGNGHVNPKAALDPGLIFDAGYKDYLGFLCTTPGIDFHEIKKYTNSPCNRTMGHPYNLNTPSITVSHLVRTQVVTRTVTNVAKQETYVMTARMQPAVAIEVNPPAMTIRAGASRKFTVTLTVRSVTGRYSFGEVLMKGSRGHKVRIPVLANGYSR 800
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre4g02111 800 SUPERFAMILY Protease propeptides/inhibitors 67 109 - -
Trre4g02111 800 Pfam Fibronectin type-III domain 702 794 IPR041469 -
Trre4g02111 800 Gene3D Peptidase S8/S53 domain 139 670 IPR036852 GO:0004252|GO:0006508
Trre4g02111 800 Pfam Subtilase family 137 622 IPR000209 GO:0006508|GO:0008236
Trre4g02111 800 ProSitePatterns Serine proteases, subtilase family, serine active site. 580 590 IPR023828 -
Trre4g02111 800 ProSiteProfiles Serine proteases, subtilase domain profile. 106 657 - -
Trre4g02111 800 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 3 111 IPR037045 -
Trre4g02111 800 Pfam Peptidase inhibitor I9 7 110 IPR010259 -
Trre4g02111 800 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 142 153 IPR023827 -
Trre4g02111 800 Gene3D - 674 797 - -
Trre4g02111 800 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 71 793 IPR045051 -
Trre4g02111 800 FunFam Subtilisin-like protease SBT1.5 139 360 - -
Trre4g02111 800 Gene3D - 352 517 - -
Trre4g02111 800 CDD PA_subtilisin_like 359 497 - -
Trre4g02111 800 PRINTS Subtilisin serine protease family (S8) signature 137 156 IPR015500 -
Trre4g02111 800 PRINTS Subtilisin serine protease family (S8) signature 579 595 IPR015500 -
Trre4g02111 800 PRINTS Subtilisin serine protease family (S8) signature 216 229 IPR015500 -
Trre4g02111 800 CDD Peptidases_S8_3 113 616 IPR034197 -
Trre4g02111 800 SUPERFAMILY Subtilisin-like 112 661 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre4g02111 Trre-Chr4 18630046 18636576 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre4g02111 5 800 Subtilisin-like Serine Gene Family AT4G30020 80.326 0.0 1335
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre4g02111 - - gmx:100784999 1451.42