Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre4g02100 ATGCGAGTTTCTACTCTGATGGGACCCAGGAAAGCTAAAAACCAACACACGGCAAGCAAGAAGCAACGCACTTGTGCAGCAAGTTCCTTAGGGCCAGTAGAGGAATTTGATACTCAGAGTGGAAAAGCAAGAAGTCTTGAGGCTGATGACTTAAGGGATCACTTGGCCGGTTTTGCTAAACAATTGAATAAGGCAAGACAAATGATATTTCCTCCTAATAGGAAATTGCTCCCATGTTTGTTAGAGGTTGTGGCCAAAGATCACAAGATGATGCTTGCTCGAAAATCAATTATTGAGAAGAGGAAAGAAGAACAAGAACAACAACGTCTTGAAATGCAACAAGAGACAGAAAAGATTGCTGAAGAGGCAGCAGAACAAACGCATCTTGCTGAAGTAAGCAATGCTGAAGAGGCAGCAGAACAAATTGCGGAAAAAGAACACGAAGAAGCTGAAGAGCGTAGAAAACTGGAGTTGTTTTTGACTAAACAAACAACTCCGGAAGAGACAAGAAATGAAGAAGAAATGGCAGAAATTAGCTACAACCATGGATTATTTGGAAAAAGCAAAGAGAGAAGAGGTTGCTCTGCTTATCGAAGCGGCATATCAACAACAAGAGGTTGA 621 0.4155 MRVSTLMGPRKAKNQHTASKKQRTCAASSLGPVEEFDTQSGKARSLEADDLRDHLAGFAKQLNKARQMIFPPNRKLLPCLLEVVAKDHKMMLARKSIIEKRKEEQEQQRLEMQQETEKIAEEAAEQTHLAEVSNAEEAAEQIAEKEHEEAEERRKLELFLTKQTTPEETRNEEEMAEISYNHGLFGKSKERRGCSAYRSGISTTRG 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre4g02100 206 MobiDBLite consensus disorder prediction 1 42 - -
Trre4g02100 206 Coils Coil 132 155 - -
Trre4g02100 206 MobiDBLite consensus disorder prediction 104 206 - -
Trre4g02100 206 MobiDBLite consensus disorder prediction 104 125 - -
Trre4g02100 206 Coils Coil 93 125 - -
Trre4g02100 206 MobiDBLite consensus disorder prediction 138 177 - -
Trre4g02100 206 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3, THETA SUBUNIT 42 157 IPR027512 GO:0005852
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre4g02100 Trre-Chr4 18502301 18504915 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre4g02100 46 130 Eukaryotic Initiation Factors Gene Family AT4G11420 51.020 8.96e-19 82.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre4g02100 - - gmx:100803796 88.1965