Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre4g02033 ATGCTGATTTGCGAAGAAACATTGAAAATCTTGAGAAGAATAGTAGTTGGCAATTTTACTGGCCCTTATGGTTGGGATACTGGAGTGCATAATGGGACTATTGAGTTCCTTTCTGTAGCTCAAAATAAGTTGAAATCTCTCACAATGGCAAGTCAACCTCGCCTCCAGGTCTTAGCTGCCAGCAAAAACAGAATTTCTACACTAAAGGGTTTTCCATATTTACCTGTTCTTGAGTTTTCATGGCCCCCTTTTGTATTGGGATCAGTTATGCTTGCAATACTTCTTGTCATGAAACACCTGGGAAAATCAAGGAAATACTTGCGATTCTTGAGAGCTGCAGGTCCTCTTACAGCAGTAGTCCTGGGAACACTCTTTGTAAAAATATTTCACCCACCATCAATTTCTTTGATGGCAAATAAAGCTACAGAAAAGGCTTCCAAGAATCATAAATTAAAACATCTCAAACGTTCAACTCAACAAATATCATCTCATGATGCAACTCCTCATACTATGCCATCAATTACTAGGACATCTAATAACACACATACTAATACTGCACCTCATATAAGGGAAAGCTTTGATGATGTCCGATGA 594 0.3855 MLICEETLKILRRIVVGNFTGPYGWDTGVHNGTIEFLSVAQNKLKSLTMASQPRLQVLAASKNRISTLKGFPYLPVLEFSWPPFVLGSVMLAILLVMKHLGKSRKYLRFLRAAGPLTAVVLGTLFVKIFHPPSISLMANKATEKASKNHKLKHLKRSTQQISSHDATPHTMPSITRTSNNTHTNTAPHIRESFDDVR 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre4g02033 197 MobiDBLite consensus disorder prediction 146 197 - -
Trre4g02033 197 MobiDBLite consensus disorder prediction 160 187 - -
Trre4g02033 197 Pfam Sulfate permease family 76 176 IPR011547 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre4g02033 Trre-Chr4 17200135 17203544 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre4g02033 78 139 Inorganic Solute Cotransporters AT3G12520 62.903 1.24e-22 92.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre4g02033 K18059 - gmx:100794754 112.079