Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre4g02021 ATGGTTGAGAATATGAAGAGAAGCAACTTTGAAGTGTTGGGAATGTGTTGTGCTTCAGAAGCAACACTTGTTGAAAGAATTTTGAAGCCTCTTCATGGAGTCAAAGTTGTCTCAGTGATTGTTCCTACAAGAACAGTTACAGTTGTTCATGATATTCTTCTTATCTCTGAATCACAAATAGCTGATGCACTAAACACTGCAAGGCTTGAAGCTAGTTTTAGACCACAAGGAGAGACCAATAATGAAAAGAAATGGCCAGACATACTTACAATGGCATGTGGATTGTTACTTGCACTTTCTTTTTTGAAGTATATATATCCTCCTTTGGGATGGTTGGCTCTTGGTTCTGTTGCCATTGGATTCCCTAAAGTTCTATTAAGGGCTATAGCTTCCATTAGAGCTCTTACTCTTAATATCAACATTTTGGTTATCTTGGCAGGTAACACTTTCTAA 453 0.3753 MVENMKRSNFEVLGMCCASEATLVERILKPLHGVKVVSVIVPTRTVTVVHDILLISESQIADALNTARLEASFRPQGETNNEKKWPDILTMACGLLLALSFLKYIYPPLGWLALGSVAIGFPKVLLRAIASIRALTLNINILVILAGNTF 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre4g02021 150 SUPERFAMILY HMA, heavy metal-associated domain 3 77 IPR036163 GO:0046872
Trre4g02021 150 FunFam Putative cadmium/zinc-transporting ATPase 3 2 75 - -
Trre4g02021 150 ProSiteProfiles Heavy-metal-associated domain profile. 6 72 IPR006121 GO:0046872
Trre4g02021 150 Pfam Heavy-metal-associated domain 10 62 IPR006121 GO:0046872
Trre4g02021 150 PANTHER CADMIUM/ZINC-TRANSPORTING ATPASE HMA2-RELATED 3 146 - -
Trre4g02021 150 Gene3D - 1 74 - -
Trre4g02021 150 CDD HMA 10 72 IPR006121 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre4g02021 Trre-Chr4 17090981 17092021 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre4g02021 5 145 Primary Pumps ATPases AT2G19110 56.738 4.45e-44 152
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre4g02021 K01534 - gmx:100815324 246.899